Pairwise Alignments

Query, 316 a.a., chemotaxis protein CheV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 308 a.a., CheW protein from Pseudomonas syringae pv. syringae B728a

 Score =  103 bits (256), Expect = 7e-27
 Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 24/309 (7%)

Query: 11  GTNELEIVEFYIDEPGYRGHYGVNVAKVLEIIRKQTVTALPEMPHPAVLGAFAHRGGRII 70
           G N LEI+ F +     R  + +NV KV E+++   +T +P+  H  V G    RG + +
Sbjct: 16  GENRLEILMFRL---AGRQLFAINVFKVQEVLQLPKLTLMPQR-HSFVCGVVNLRG-QTL 70

Query: 71  PLVDLAAYLGKPLSDDAAQRKIIITEFNQVVTGFLVSGVTRIHRISWIDVEAPGRFLQGM 130
           P++DL+  +G           II+TE+N+ V  FLV GV RI  ++W  +  P   +   
Sbjct: 71  PVIDLSQAIGMRPLVPGPGSTIIVTEYNRSVQAFLVGGVDRIVNMNWDAIMPPP--VSAG 128

Query: 131 SSSSITGVVRLEGRVVFLLDMESIVAEMHPDLSIRMGRTRATAQEAPM----RRYTVLHA 186
               +T + +++ ++V ++D+E ++AE+ P  + ++ R +    E P+    R   VL  
Sbjct: 129 RQHYLTAISKVDDQLVEIIDVEKVLAEIVP-YNAKVSREKL---EDPVLENARGREVLLV 184

Query: 187 DDSGSVRKLVRNLLEASGRFEVLQADDGQGAWEMLETLRAEAEGRGQRIADVVQAVISDI 246
           DDS      +R+ L   G  ++  A DG  A  ML+   A+A   G+ + + +  V +D 
Sbjct: 185 DDSKVALAQLRDTLSQLG-LKLHVASDGLKALNMLKAW-ADA---GENVHEKLLMVFTDA 239

Query: 247 EMPRLDGLTLCRRIKEDVALRVLPVALFSSLVTDKLEHKGRSVGADAQFAK--PD--LQQ 302
           EMP +DG  L   I+ D  LR L + L +SL     E   + VG D   +K  PD  ++ 
Sbjct: 240 EMPEMDGYRLTTEIRNDARLRGLYIVLHTSLSGSFNESMVKKVGCDNFLSKFQPDKLVEV 299

Query: 303 LSERLLELL 311
           + ERLL ++
Sbjct: 300 VRERLLMIV 308