Pairwise Alignments

Query, 316 a.a., chemotaxis protein CheV (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 306 a.a., response regulator receiver modulated CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  124 bits (311), Expect = 3e-33
 Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 26/301 (8%)

Query: 11  GTNELEIVEFYIDEPGYRGHYGVNVAKVLEIIRKQTVTALPEMPHPAVLGAFAHRGGRII 70
           G N LE++ F ++    R  +G+NV KV E+++   +T LP++ +P V G  AH  G+ I
Sbjct: 16  GQNRLELLLFKLNG---RQRFGINVFKVKEVLQCPPLTGLPKL-NPYVRGV-AHIRGQTI 70

Query: 71  PLVDLAAYLGKPLSDDAAQRKIIITEFNQVVTGFLVSGVTRIHRISWIDVEAP----GRF 126
            ++DL+A  G    +D     III+E+N+ V GFLV  V RI  ++W  +  P    GR+
Sbjct: 71  SVIDLSAATGGRPIEDTEGCFIIISEYNRSVQGFLVKSVERIINMNWEAIMPPPQGAGRY 130

Query: 127 LQGMSSSSITGVVRLEGRVVFLLDMESIVAEMHP---DLSIRMGRTRATAQEAPMRRYTV 183
                 S +T V  +EG +V +LD+E I+ E+ P    +S  +       +E   R Y +
Sbjct: 131 ------SYLTAVTEIEGELVEILDVEKILDEISPVKTQISQEVDEQLTIDRE---RHYHI 181

Query: 184 LHADDSGSVRKLVRNLLEASGRFEVLQADDGQGAWEMLETLRAEAEGRGQRIADVVQAVI 243
           +  DDS   RK +   LE S   ++  A DG+ A + L ++ AE +     +A  +  +I
Sbjct: 182 MVIDDSAVARKQIIRALE-SLSLQIDTAKDGREALDKLVSVAAEMD----NVAHEIPLII 236

Query: 244 SDIEMPRLDGLTLCRRIKEDVALRVLPVALFSSLVTDKLEHKGRSVGADAQFAKPDLQQL 303
           SDIEMP +DG TL   I+++  L+ + V L +SL     +     VGA+   AK +  +L
Sbjct: 237 SDIEMPEMDGYTLTAEIRDNPKLKDIKVVLHTSLSGVFNQAMVEKVGANDFIAKFNPDEL 296

Query: 304 S 304
           +
Sbjct: 297 A 297