Pairwise Alignments

Query, 440 a.a., ABC-1 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

 Score = 80.9 bits (198), Expect = 9e-20
 Identities = 68/258 (26%), Positives = 115/258 (44%), Gaps = 12/258 (4%)

Query: 63  RITAQLAQMRGAAMKVGQLLSLEGGDFLPPELAEILGHLRADAHFMPPKQLDSVLKRHFG 122
           R+   L ++    +K GQ++S    D  PP +A+ L  L+         Q   +++   G
Sbjct: 56  RLRLALQELGPVWIKFGQMMSTRR-DLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELG 114

Query: 123 PGYRGRFAKFDVRPVAAASIGQVHRAVTK-DGRDVALKVQYPGVRESIDSDVRNVGSLLR 181
                 F  FD++P+A+ASI QVH A  K +GRDV LKV  P +R  ID+D++ +  + R
Sbjct: 115 APLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVAR 174

Query: 182 L-SGLVPKEIDLAP--LMEEARRQLHEEADYGREAEMLSRFGGLLAGDDRFVVPELYADL 238
           + +  +P+   L P  ++ E  + L +E D  REA    +        +   VPE+  D 
Sbjct: 175 IVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDF 234

Query: 239 TTRDVL------GMSFVESVAIEGQGDAPQKMRDRLMESLISLMLRELFEFGLMQTDPNF 292
               V+      G+   +   +   G   + + +R +    + + R+ F    M     F
Sbjct: 235 CNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVF 294

Query: 293 ANYRVQPETGRLVLLDFG 310
            N    PE  + + LD G
Sbjct: 295 VNPN-HPENPQWIGLDCG 311