Pairwise Alignments

Query, 440 a.a., ABC-1 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 452 a.a., Abc1 protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  141 bits (355), Expect = 5e-38
 Identities = 100/308 (32%), Positives = 154/308 (50%), Gaps = 13/308 (4%)

Query: 15  NSRAGRMARLGGMAAGVAGNMAFEGGRQLLS--GQRPRMEDLLLTPGNAARITAQLAQMR 72
           NS  GR  R   ++  + G  A   G + L   G R RM         A+ +   L  ++
Sbjct: 5   NSLGGRFRRYARVSTAMGGIAARAAGEKYLGFKGDRARM---------ASDLREALGGLK 55

Query: 73  GAAMKVGQLLSLEGGDFLPPELAEILGHLRADAHFMPPKQLDSVLKRHFGPGYRGRFAKF 132
           G  MKV Q++S    D LP E    L  L+ADA  M    +   +    GP + GRFA F
Sbjct: 56  GPLMKVAQIMSTIP-DALPQEFTAELTQLQADAPRMGWPFVKRRMTAELGPNWLGRFASF 114

Query: 133 DVRPVAAASIGQVHRAVTKDGRDVALKVQYPGVRESIDSDVRNVGSLLRLSGLVPKEIDL 192
           D   VAAAS+GQVHRA+  DGR +A K+QYP +  ++++D+  +  ++ L       ID 
Sbjct: 115 DHDAVAAASLGQVHRAIHLDGRALACKLQYPDMDSTVEADLSQLKIIIGLYRRYDGAIDP 174

Query: 193 APLMEEARRQLHEEADYGREAEMLSRFGGLLAGDDRFVVPELYADLTTRDVLGMSFVESV 252
             +  E   +L EE DY REA  +  +  +L  +    VPE  ADL+T+ +L M++++  
Sbjct: 175 TEIHAEITERLREELDYAREARNMRLYRHMLRDEAGVHVPEPIADLSTKRLLTMTWLQGE 234

Query: 253 AIEGQGDAPQKMRDRLMESLISLMLRELFEFGLMQTDPNFANYRVQPETGRLVLLDFGAT 312
            +    +   + R+ L  ++        +++G++  DP+  NY V+ E   + LLDFG  
Sbjct: 235 RLLTFINHSPEERNHLAYNMFRAWYVPFYDYGVIHGDPHLGNYTVR-EDFSVNLLDFGTI 293

Query: 313 RVFGPDLV 320
           RVF P  V
Sbjct: 294 RVFRPVFV 301