Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 426 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2C3

 Score =  202 bits (515), Expect = 1e-56
 Identities = 132/435 (30%), Positives = 233/435 (53%), Gaps = 32/435 (7%)

Query: 9   VLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPL 68
           +L+G  + L+L+GM +A AL   A +G W I    D+ F+ + +    G+  +    IP 
Sbjct: 5   ILLGSFIVLILIGMPVAYALGAAALIGAWWI----DIPFQAVMIQVAGGVNKFSLLAIPF 60

Query: 69  FVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRV 128
           FVL G +++   + R     A  L+  +  GL +  + A+T F A++G S+A  A    V
Sbjct: 61  FVLAGAIMAEGGMSRRLVACAGVLVGFVRGGLSLVNIVASTFFGAISGSSVADTASVGSV 120

Query: 129 AVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILA--EVSIGGMFLAGILPGL 186
            +PEM R GY   FS       SV  +L PPS   ++Y + A   VSI  +F+AGI+PGL
Sbjct: 121 LIPEMERKGYPRDFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGIVPGL 180

Query: 187 MLAGGFVVMLIGLTLAFPRFVLADPDAVKARKRD---TDLTPM-PAREMIAKLTPIVLLV 242
           +++   +V+ +                + A+KR+    ++ PM  A +++ +    ++ +
Sbjct: 181 LMSACLMVLCL----------------IFAKKRNYPKGEVIPMRQALKIVGEALWGLMAM 224

Query: 243 ILVLGGLYTGFFTPTEAGGIGAFGALIVAL-SRRSLDRHKLWQVMKQTGVISVSILLLLV 301
           +++LGG+ +G FT TE+  I    +  V +   R     +L ++M +T V ++SI+++L+
Sbjct: 225 VIILGGILSGIFTATESAAIAVLWSFFVTMFIYRDYKWRELPKLMHRT-VRTISIVMILI 283

Query: 302 A-ASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPI 360
             A+ +  ++ +  +P  IT +           L    V++LL+G ++D   ++LI+ PI
Sbjct: 284 GFAASFGYIMTLMQIPAKITTMFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPI 343

Query: 361 AAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPF 420
             P+  G+G+D + FG++ ++ + IGL+TPP G  +F V + +    VS+ES   A LPF
Sbjct: 344 LMPVIVGIGVDPVQFGMIMLVNLGIGLITPPVGAVLF-VGSAIG--KVSIESTVKALLPF 400

Query: 421 IAVMLLVLVIVALVP 435
            AV+ LVL++V  VP
Sbjct: 401 YAVLFLVLMLVTYVP 415