Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 425 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Acidovorax sp. GW101-3H11

 Score =  219 bits (557), Expect = 2e-61
 Identities = 125/429 (29%), Positives = 239/429 (55%), Gaps = 20/429 (4%)

Query: 9   VLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLELTAYSGIADYLFATIPL 68
           V+I  +V    + + +A+++   + +GI     N+ ++ + +    ++ I  +  A IP 
Sbjct: 4   VMISTMVLCFALTISVAVSIGLASILGIQASNANMLISVKEM----FASINKFPLAAIPF 59

Query: 69  FVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRV 128
           F+L G L+    + R   + A+ ++  +  GL +  V    IFAAV+G S+A+      +
Sbjct: 60  FILAGNLMETGGISRRLVEFAKSIVGGVQGGLPMTCVLTCMIFAAVSGSSVATTFAIGAI 119

Query: 129 AVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLML 188
            +P + +HGY  +++A   A S+ LG++IPPS+ +I+YG+ AEVSIG +F+AG  PGL++
Sbjct: 120 LIPALIKHGYPTSYAAALQATSAELGVIIPPSIPMILYGVSAEVSIGELFIAGFGPGLLI 179

Query: 189 AGGFVVMLIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVILVLGG 248
           +G  ++           FV A        K D D   MP  +   +    +L+ +++LGG
Sbjct: 180 SGALML-----------FVWAYCKYKGWGKNDGD-GRMPFGKATLQAGWALLMPVIILGG 227

Query: 249 LYTGFFTPTEAGGIGAFGALIV-ALSRRSLDRHKLWQVMKQTGVISVSILLLLVAASFYS 307
           +Y G FTPTEA  +  F AL+V  +  R +    L+ +++++ + S  I+ ++  A  ++
Sbjct: 228 IYGGVFTPTEASAVAVFYALLVGVVIYREIKLRDLYAILRKSAISSAVIMFIIANAGLFA 287

Query: 308 RMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIILLMGMILDSTSILLIMVPIAAPIAQG 367
            ++  AG+P+AI   +      P  FL      + ++GM +++++ ++++ PI AP+A  
Sbjct: 288 FLITRAGVPDAIGRWLEAVLQSPALFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAMH 347

Query: 368 MGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNTLNDPDVSVESIFAATLPFIAVMLLV 427
            GID +HFG++ V+ + +G++TPPFG+++F          +S++ I    LPF+ V+L+ 
Sbjct: 348 FGIDPVHFGLIMVVNLALGMITPPFGVNLFAACTVAK---ISLDRIIKHLLPFVCVILVC 404

Query: 428 LVIVALVPT 436
           L+++  VP+
Sbjct: 405 LLVITYVPS 413