Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  205 bits (521), Expect = 3e-57
 Identities = 133/457 (29%), Positives = 241/457 (52%), Gaps = 48/457 (10%)

Query: 9   VLIGVLVGLVLMGMHIAIALFGVAFVGIWLIRDNIDLAFRMLEL-TAYSGIADYLFATIP 67
           +L  +++G++++G+ IAI+L G++ +   L   +  LA     L  A++G   Y    IP
Sbjct: 5   LLFILVIGMMIVGVPIAISL-GLSSILFLLWHSDASLASVAQTLFNAFAG--HYTLLAIP 61

Query: 68  LFVLMGLLVSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTR 127
            F+L    +S   V +   + A  ++     GL +A+V A  +FAA++G S A+      
Sbjct: 62  FFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGS 121

Query: 128 VAVPEMTRHGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLM 187
           + +  M ++GY   F+AG +  +  LG+LIPPS+++++Y     VS+G MFL G++PGL 
Sbjct: 122 IVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL- 180

Query: 188 LAGGFVVMLIGLTLAFPRF----VLADPDAVKARKRDTDLTPMPAREMIAKLTPIVLLVI 243
           LAG  +++ I +T           +   +A+KA K               + +  +LLV+
Sbjct: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAK---------------EASWGLLLVV 225

Query: 244 LVLGGLYTGFFTPTEAGGIGAFGALIVA---------LSRRSLDRHKLWQVMK------- 287
           ++LGG+Y G FTPTEA  + A  +  +A          + ++  +  L +V++       
Sbjct: 226 IILGGIYGGIFTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDT 285

Query: 288 -----QTGVISVSILLLLVAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLFFYAVIIL 342
                  G +++ ++ ++  A     +L    +P  IT  +  +G GP+ FL    +I+L
Sbjct: 286 KATLYDAGKLTIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILL 345

Query: 343 LMGMILDSTSILLIMVPIAAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGISVFTVHNT 402
           + G  ++ + +L+I+ P+  PIA  +GID +H GI+ V+ +EIG++TPP G+++F    T
Sbjct: 346 VGGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFV---T 402

Query: 403 LNDPDVSVESIFAATLPFIAVMLLVLVIVALVPTTAT 439
                +S+ ++  A LP++ VM L L+IV  VP  +T
Sbjct: 403 SGVAKMSMMNVVKAALPWVGVMFLFLIIVTYVPWVST 439