Pairwise Alignments

Query, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 466 a.a., alpha-ketoglutarate TRAP transporter, large permease component (from data) from Shewanella amazonensis SB2B

 Score =  193 bits (490), Expect = 1e-53
 Identities = 136/467 (29%), Positives = 230/467 (49%), Gaps = 67/467 (14%)

Query: 18  VLMGMHIAIALFGVAFVGIWLIRDN--IDLAFRMLELTAYSGIADYLFATIPLFVLMGLL 75
           +L+GM IAIAL   + + I L  ++    +A ++ E T+      Y    IP F+L    
Sbjct: 14  MLLGMPIAIALGFSSMLTILLFSNDSLASVALKLYEATS----EHYTLLAIPFFILSSAF 69

Query: 76  VSVSNVGRDTFQVAEELLRRMICGLGVATVAANTIFAAVTGVSIASAAVFTRVAVPEMTR 135
           +S   V R     A + +  +  GL +A+V A  +FAAV+G S A+ A    + +  M R
Sbjct: 70  LSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIGSIVIVGMVR 129

Query: 136 HGYRPAFSAGTVAGSSVLGMLIPPSLLLIIYGILAEVSIGGMFLAGILPGLMLAGGFVVM 195
            GY   F+AG +  S  LG+LIPPS+++++Y    EVS   MF+AG++PGL++    V++
Sbjct: 130 AGYPQKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGLLMG---VLL 186

Query: 196 LIGLTLAFPRFVLADPDAVKARKRDTDLTPMPAREMI----AKLTPIVLLVILVLGGLYT 251
           ++ + +              AR ++    P P  + +    AK    + L+ +VLG +Y 
Sbjct: 187 MVAIYIV-------------ARIKNLPSRPFPGVKALSLSSAKAMGGLALIFIVLGSIYG 233

Query: 252 GFFTPTEAGGIGAFGALIVA------------------------------------LSRR 275
           G  +PTEA  +    A +VA                                    L + 
Sbjct: 234 GVASPTEAAAVACVYAYLVAVFGYRDIGPLKEVPWRKEGEAILAAIVRNLLHVGLGLIKT 293

Query: 276 SLDRHKLWQVMKQTGVISVSILLLLVAASFYSRMLAIAGLPNAITGLVTDSGFGPLGFLF 335
             D+ ++  V++    +S+ +L ++  A  ++ +L    +P+ I   +   G  P GFL 
Sbjct: 294 PTDK-EIRNVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAETIVGWGLPPWGFLI 352

Query: 336 FYAVIILLMGMILDSTSILLIMVPIAAPIAQGMGIDLMHFGIVTVLAVEIGLLTPPFGIS 395
              +++L  G  ++ ++ILLIM PI  PIA  +GID +H GI+ V+ +EIG+LTPP G++
Sbjct: 353 IVNLLLLAAGNFMEPSAILLIMAPILFPIAVQLGIDPIHLGIIMVVNMEIGMLTPPVGLN 412

Query: 396 VFTVHNTLNDPDVSVESIFAATLPFIAVMLLVLVIVALVPTTATLFL 442
           +F    T      S+  +  A LP++ ++L  LV++  VP   +LFL
Sbjct: 413 LFV---TAGITGRSIGWVIHACLPWLLLLLGFLVLITYVP-QISLFL 455