Pairwise Alignments

Query, 184 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 182 a.a., dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  127 bits (318), Expect = 1e-34
 Identities = 69/178 (38%), Positives = 103/178 (57%), Gaps = 4/178 (2%)

Query: 1   MQIEDTPLPGVKLLTPARFGDARGFFSESYSRRVLAGHGITLDFVQDNHSLSAQVGTVRG 60
           M    T + GV L+ P  + D RG+F E++ +         +DFVQDN S S+  G +RG
Sbjct: 1   MNYIQTEIDGVWLIEPNVYSDERGYFMEAFKKEEFEAKIGPVDFVQDNESKSS-FGVLRG 59

Query: 61  LHFQAPPHAQDKLVRCGRGRLFDVAVDVRRGSPTYGQWFGAELSFENGKQLLVPAGFLHG 120
           LH+Q   ++Q KLVR  +G++ DVAVD+RR SPT+G+   A LS EN +Q  +P GF HG
Sbjct: 60  LHYQKGEYSQAKLVRVLKGKVLDVAVDLRRSSPTFGKHVSALLSEENKRQFFIPRGFAHG 119

Query: 121 FVTREPDTEIVYKCSDYYAPECDGAVHW--DSCGIDWGF-EGDPVISAKDAAAVRLAD 175
           FV    +   +YK  + YAP+ + ++ +  ++ GIDW   E   ++S KD   +   D
Sbjct: 120 FVVLSEEAVFMYKVDNKYAPQAEASIVYNDETLGIDWMLGESQMLLSPKDKEGMAFRD 177