Pairwise Alignments

Query, 673 a.a., 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 2e-65
 Identities = 198/656 (30%), Positives = 292/656 (44%), Gaps = 41/656 (6%)

Query: 16  AWVTVDNP--PVNATSTAVRQGLLDAVTRVQGAR-----LAILRCAGRTFIAGGDMREFD 68
           AW+ +D P   +N    A  + +      +   R     L I       FIAG D+R  +
Sbjct: 17  AWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFIAGADVRMLE 76

Query: 69  APPQPPDLP-------DVVDAIEASATPFVAVMQGTVLGGGLEIAMGCAYRIAAPG--TR 119
           A     +          +   +     P VA + G  LGGGLE+A+ C YR+      TR
Sbjct: 77  ACQSVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELALACDYRVCTEDEVTR 136

Query: 120 FGLPEVTVGLIPGAGGTQRAPRLFGWDAAIDMACAGKLLSAQEAHARGALDAIADDPEA- 178
            GLPEV +GL+PG+GGTQR PRL G   A+D+   GK L A++A   G +DA        
Sbjct: 137 LGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAKKLGVVDACVPHSVLL 196

Query: 179 -AARALVPEP--------RIPVSERPAPPPPDSARIAAHR--RTLAARARGQTAPLQA-L 226
             A+ L+ E          +P+ E+         ++   +  +    + RG     QA L
Sbjct: 197 DVAKRLLEEKGHKKRAQVTLPIKEKLLANTDLGRKLIFDQAAKKTQQKTRGNYPAAQAIL 256

Query: 227 DALLWATGP-FREGQRKERALHLSLRASDQSRALRHAFFAERTVARPAVIRDRTPREIAR 285
           + + +        G   E      L  + +S+ALR  FFA  T  +  +  D  P  +A 
Sbjct: 257 EVIQYGLEKGMHAGLEYEAKRFAELVMTRESKALRSIFFAT-TEMKKDLGADAKPAPVAA 315

Query: 286 IAVMGGGLMGAGIAAACLGAGYRVDLLERDAATAEA--ARDRVRGLIAGALRRGKIDQAR 343
           + V+GGGLMGAGI+   + A  +  +  +D A      A +    L     +R  + +A+
Sbjct: 316 VGVLGGGLMGAGISHVTV-AKAKTSVRIKDVANDGVLNALNYNYKLFDKQRQRKILTKAQ 374

Query: 344 HDAHCAALRTGVGIGHAAEADLAIEAVFEETATKRAAFAALAQVMAPDAILATNTSYLDP 403
             A  + L  G G       D+ IEAVFE+   K+   A +     P  I ATNTS L  
Sbjct: 375 LQAQMSQLSGGTGFVGFDRCDVVIEAVFEDLKLKQQMVADIEANAKPTTIFATNTSSLPI 434

Query: 404 REIFAGIPAPDRCLGLHFFAPAHVMKLLEVVRLPETSAETLATAFALAGRLRKVAVLSGI 463
            +I +    P   +GLH+F+P   M L+EV+    TS ET+AT   LA +  K  ++   
Sbjct: 435 HQIASQAQRPQNIVGLHYFSPVEKMPLVEVIPHATTSDETIATVVTLARKQGKTPIVVKD 494

Query: 464 CDGFIGNRMLAAYRRAAEYMLADGALPEQIDGAMRAYGMAMGPFEAQDLSGLHIAEANRR 523
           C GF  NR+LA Y   A  +L  G   E++D A+  +G  +GP    D  G+ I      
Sbjct: 495 CAGFYVNRILAPYMNEAAQVLMAGEPIEKLDAALLDFGFPVGPITLLDEVGVDIGAKIMP 554

Query: 524 RQDATRPARERYVTLSDQLCALGRTGQRAGKGWYAYAEGDRRPRVDPAVTALITDYSAAH 583
                   R +   + D L    R G+++GKG+Y Y +G ++  VD +V      Y    
Sbjct: 555 ILVKELGPRFQGPDVFDVLLKDNRKGRKSGKGFYTY-KGSKKKEVDKSV------YKLLK 607

Query: 584 GLPRRTHDAGEIQARLLAVLANEGARLVEEGIADSDAAVDMVKLHGYGFPRWRGGP 639
             P    +  EI  R L  + NE  R ++EGI  S    DM  + G GFP + GGP
Sbjct: 608 LTPESKLNDKEIAMRCLLPMLNEAVRCLDEGIIRSARDGDMGAIFGIGFPPFLGGP 663