Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 111 a.a., ribosome-associated translation inhibitor RaiA from Pantoea sp. MT58

 Score = 45.8 bits (107), Expect = 3e-10
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 2/93 (2%)

Query: 1  MRYQITGKQIDIGEALQRHVKAELSEVVGKYAERPTDANVVFSKDAYNHVCEATVHLSTG 60
          M   IT KQ+DI  A++ HV+  L++ + K+     + ++V SK+    V +AT++   G
Sbjct: 1  MILNITSKQMDITPAIRSHVEDRLAK-LEKWQTDLINPHIVLSKEPKEFVADATINTPNG 59

Query: 61 LTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRR 93
           T  A A   ++Y A +    K+E+QL + + +
Sbjct: 60 -TLVASAKHDDMYTAINDLIAKLERQLNKVQHK 91