Pairwise Alignments

Query, 191 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 179 a.a., ribosomal subunit interface protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 61.2 bits (147), Expect = 1e-14
 Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 1   MRYQITGKQIDIGEALQRHVKA---ELSEVVGKYAERPTDANVVFSKDAYNHVCEATVHL 57
           M    T K  +  E L+++ +    +L+  VGK A    +  V  S D +    E  + +
Sbjct: 1   MNIAFTFKNFEPSEHLKKYARRRFEKLARFVGKSAN--LELQVALSLDKFRQKAEVQL-V 57

Query: 58  STGLTAQAKASAHEIYAAFDKCSEKMEKQLRRYKRRLKNHHRDRTEPVALSGASTYILDG 117
              +   A   + ++YA  D   +K+E QL+++  R+K   R       +    TY  +G
Sbjct: 58  GDSINIAAVEQSEDMYATIDLVLDKLEAQLKKHVSRVKERRRSARTNANID-VFTYHTEG 116

Query: 118 SEGSDEHEPETLQPIIVAEMETTIPSVSVGEAVMQMELAEAPVLVFRNEGHGGINVVYRR 177
            EG D          IV   +     + V EA MQ++  +   LVF N     INV+YRR
Sbjct: 117 -EGEDR--------AIVGTDQFVPKPLHVDEAAMQLDALDYEFLVFLNAESERINVIYRR 167

Query: 178 DDGNIGWID 186
            +G+ G ID
Sbjct: 168 RNGDFGLID 176