Pairwise Alignments

Query, 614 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 597 a.a., ABC-type multidrug transport system, ATPase and permease components from Sphingomonas koreensis DSMZ 15582

 Score =  315 bits (807), Expect = 4e-90
 Identities = 194/485 (40%), Positives = 281/485 (57%), Gaps = 16/485 (3%)

Query: 130 SVSFFDNDFAGRIAQKQMQTARAVTDITAEVINVVAFALASILGSVILLLTIDPWVALAL 189
           S  +  N FAG   +K  +   A   +   ++  +  ++A + G+++LL    P + + +
Sbjct: 113 STDWHANSFAGSTVRKITRGMWAFDTLNDVLLLQLLPSIAVLGGTMLLLGWHWPVLGVVM 172

Query: 190 GVWFVAYMALIRAFLPRVRKRSAARAGA-RANVTGQVVDTVTNIKTVKLFGHSEHEDQAA 248
            +  VAY+A+      R    +A  + A    + G + D + +   VK FG  E E+Q  
Sbjct: 173 AIGAVAYVAMTVVLATRWASPAATLSNAWDTKLGGMLSDAIGSNAVVKAFGAEEREEQRI 232

Query: 249 LDAMGSY----RRKALDFGYISSSFRFWLMAIAGVLPVLLIGGTLILWTQGTATPGDIAA 304
              +  +    RR  + + +  S+     +A+   +   + G  L LW  G ATPGD+  
Sbjct: 233 GGLLAKWAKRTRRTWMRYTWSGSA----QIAVLWAIRSAITGTALWLWWTGAATPGDVTF 288

Query: 305 AGAIAIRIAQMTGWVSFTLMAIYANVGEVEDGMRTLTVPHALTDADDASEMEARRGRITF 364
             A    +      V F +  +   V E+E+ +     P  + D  DA  +    G + F
Sbjct: 289 VLASYFVVHGYLVDVGFHIHHMQRAVNEMEELVDLHDQPLGIDDRTDAQPIHIGAGEVHF 348

Query: 365 ENVTFMYG-RDVGGIDGISLTVAPGQKLGLVGASGAGKSTLTGLLLRLYDTEEGRVTIDG 423
           ++VTF YG  +    + ++LT+  G+++GLVG SG+GK+T   L+ RLYD  EGRVTIDG
Sbjct: 349 DDVTFRYGGHETPLYEHLTLTIRGGERVGLVGHSGSGKTTFVKLIQRLYDVNEGRVTIDG 408

Query: 424 VDVRDVTQDSLRQQIAMVTQETAMFNRSARDNILYGRPDATEAEMIAAAKRAEAHDFIMD 483
            DV   TQ SLR QIA+V QE  +F+RS  DNI Y RP A++AE+ AAA+ A AHDFI+ 
Sbjct: 409 QDVSHATQQSLRAQIAIVQQEPILFHRSLADNIAYARPGASQAEVEAAARLANAHDFIVR 468

Query: 484 MQDHAGRKGYDAHLGERGVKLSGGQRQRIALARAFLKDAPILVLDEATSALDSEVEASIQ 543
           +      +GY   +GERGVKLSGG+RQR+ALARAFL DAPIL+LDEATS+LDSE EA IQ
Sbjct: 469 LP-----RGYATLVGERGVKLSGGERQRVALARAFLADAPILILDEATSSLDSESEALIQ 523

Query: 544 DALDRVMEGKTVIAIAHRLSTIAQMDRIVVLDQGRVVEDGTHTDLLAQ-GGLYARYWNRQ 602
            A+DR+M+G+T I IAHRLST+  +DRI+V D+GR++EDG H  LL   GG Y R ++RQ
Sbjct: 524 QAMDRLMKGRTAIVIAHRLSTVRTLDRILVFDKGRIIEDGDHDTLLVNAGGQYRRLFDRQ 583

Query: 603 SGGFI 607
           SG  +
Sbjct: 584 SGNIV 588