Pairwise Alignments

Query, 434 a.a., PAS domain containing protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 48.9 bits (115), Expect = 9e-10
 Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 42/315 (13%)

Query: 61  RRELAQLRATV-----------EHIPLILWRQDNDGAL------TWANKPYIDLTEKLHP 103
           RR+  QLRA +           EH+ L LW +     L       +   P+ DL    +P
Sbjct: 466 RRQSTQLRAVLQNMPQGISVFDEHLRLQLWNEGMREVLGLPAEALYRGVPFEDLVR--YP 523

Query: 104 DRAGRW----PMPHLFKQKSLAHPDTPGHRRISIDMEDGEKRWFEVQGFRVQDE-----I 154
            + G +    P  H+ ++K+LA    P   R      DG  R   VQG  + D+      
Sbjct: 524 AQRGEYGPGDPEQHVQERKALAMQFKP--HRFERTRLDG--RTTLVQGEPLFDDGQLTGF 579

Query: 155 LYSATPIDMTVKAEVSLRNFVQTLTSTFAHLQVGLAIFDKRRQLVLFNPALTDLTTLEPE 214
           + + T I  + + E +LRN    L +   +L  G++++D  ++++  N     L  L P+
Sbjct: 580 ITTYTDISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDL-PD 638

Query: 215 WLSAR--PGLSEVLDRLRDKNMLPEPKDYKEWRNRLTGLEKAASSGTFEETWALPTGQNY 272
            L A+  P L +++     +       + +  R  L  L++  ++    E    P G   
Sbjct: 639 TLFAQGYPTLEDMVRFNARRGEYGPGDEERRTRGVLRALQRPNNTAVLRER---PDGTVL 695

Query: 273 RILGRPHHDGGIALTFEDISSEVSLTRRFRSEIELGQTALDTLEEAIAVFSENGTLVLSN 332
            I      DG   + + DI++      R  +E++L +       EAI +  +   ++  N
Sbjct: 696 EIRQVNLGDGSTIIIYTDITAR----HRAEAELKLAEKVFANSPEAIMICDQGNRIISVN 751

Query: 333 KAYSELWDVSENDGL 347
           +A+ ++   ++ + L
Sbjct: 752 RAFCDITGYAQEEVL 766



 Score = 40.0 bits (92), Expect = 4e-07
 Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 13/219 (5%)

Query: 135 MEDGEKRWFEVQGFRVQDE----ILYSATPIDMTVK--AEVSLRNFVQTLTSTFAHLQVG 188
           ++DG  R F  +G    D     +  S T  D+T +  AE   R     L +   ++  G
Sbjct: 423 LQDGRLRHFINRGRLFWDARGQPLRASGTTQDITERKLAEEEYRRQSTQLRAVLQNMPQG 482

Query: 189 LAIFDKRRQLVLFNPALTDLTTLEPEWLSARPGLSEVLDRLRDKNMLPEPKDYKEWRNRL 248
           +++FD+  +L L+N  + ++  L  E L  R    E L R   +     P D ++     
Sbjct: 483 ISVFDEHLRLQLWNEGMREVLGLPAEAL-YRGVPFEDLVRYPAQRGEYGPGDPEQHVQER 541

Query: 249 TGLEKAASSGTFEETWALPTGQNYRILGRPHHDG----GIALTFEDISSEVSLTRRFRSE 304
             L        FE T     G+   + G P  D     G   T+ DIS      +  R++
Sbjct: 542 KALAMQFKPHRFERTRL--DGRTTLVQGEPLFDDGQLTGFITTYTDISESKRNEQALRNQ 599

Query: 305 IELGQTALDTLEEAIAVFSENGTLVLSNKAYSELWDVSE 343
             + Q  L+ L + ++++     ++  N+ +  L D+ +
Sbjct: 600 NAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDLPD 638