Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 366 a.a., DNA polymerase III beta subunit (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  263 bits (672), Expect = 6e-75
 Identities = 140/372 (37%), Positives = 220/372 (59%), Gaps = 6/372 (1%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQ 60
           M+ +++R   L+ ++Q  +VVERR T+P+LAN+L++     +S   TDL++E++ R   +
Sbjct: 1   MRFTLQREAFLKPLAQVVNVVERRQTLPVLANLLVQVNNGQLSLTGTDLEVEMISRTMVE 60

Query: 61  VERAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPVM 120
             + G TT+PA  L +I+R LPDG+ V ++    K  + V AGRS F+LATLP  DFP +
Sbjct: 61  DAQDGETTIPARKLFDILRALPDGSRVTVSQTGDK--VTVQAGRSRFTLATLPANDFPSV 118

Query: 121 TTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDGH 180
              E T   A P   L+ L +++ FA++ ++ RYYLNG+   + DG     LRCVATDGH
Sbjct: 119 DEVEATERVAVPEAGLKELMERTAFAMAQQDVRYYLNGLLFDLRDG----LLRCVATDGH 174

Query: 181 RLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLTS 240
           RLA  + +L  +      +IVPRK V EL +LLE  +  + + +  + IR    ++T TS
Sbjct: 175 RLALCETELEKSGSAKRQIIVPRKGVTELLRLLEAADRDVELELGRSHIRVKRGDVTFTS 234

Query: 241 KVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLILSV 300
           K+IDG FPDY  VIP+   R+++VD      ++ R A +S+E+ R V++ +   +L +S 
Sbjct: 235 KLIDGRFPDYEAVIPIGADREVKVDREALRASLQRAAILSNEKYRGVRVEVSPGQLKISA 294

Query: 301 NAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMREGSD 360
           + P+   A+EE+      + L IGFN  YLL+  S +  E+ V     A    ++RE S 
Sbjct: 295 HNPEQEEAQEEIEADTKVDDLAIGFNVNYLLDALSALRDEHVVIQLRDANSSALVREASS 354

Query: 361 SSAIYVVMPMRV 372
             + +VVMP+R+
Sbjct: 355 EKSRHVVMPLRL 366