Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 366 a.a., DNA polymerase III, beta subunit (RefSeq) from Shewanella loihica PV-4

 Score =  238 bits (607), Expect = 2e-67
 Identities = 134/373 (35%), Positives = 212/373 (56%), Gaps = 8/373 (2%)

Query: 1   MKISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQ 60
           MK SI+R  LL+ +      VERR+ +PILAN+L+E  G S+    TDL++E+V +   Q
Sbjct: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60

Query: 61  VE-RAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPV 119
            E + G TTVPA    +IV+ LPD   V L  +    RL + +GRS F+LATLP E++P 
Sbjct: 61  GEVQEGRTTVPAKKFLDIVKSLPDQ--VELKIEQQDNRLLLRSGRSRFTLATLPAEEYPN 118

Query: 120 MTTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDG 179
           +   +    F      L+ L D ++F+++ ++ RYYLNG+ +       G  LR +ATDG
Sbjct: 119 VDAFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLLLET----EGNVLRAIATDG 174

Query: 180 HRLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLT 239
           HRLA     + D+      VIVPRK V EL++L E ++  + +S+ E  IR  T     T
Sbjct: 175 HRLALSHRMVQDSLPEKQ-VIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFT 233

Query: 240 SKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLILS 299
           SK++DG FPDY RV+P    + +    +   +A+ R + +S+E+ R V++ L+++ + ++
Sbjct: 234 SKLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKIT 293

Query: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMREGS 359
            N P+   AEE L + Y +  LEIGFN  YLL++ + +  ++            ++    
Sbjct: 294 ANNPEQEEAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHV 353

Query: 360 DSSAIYVVMPMRV 372
           +  ++YVVMPMR+
Sbjct: 354 EEDSMYVVMPMRL 366