Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 368 a.a., DNA polymerase III, beta subunit from Dechlorosoma suillum PS

 Score =  241 bits (616), Expect = 2e-68
 Identities = 140/376 (37%), Positives = 221/376 (58%), Gaps = 17/376 (4%)

Query: 3   ISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQV- 61
           I  +R TLL  +     +VE+R+T+PIL+NVL+E +GD+++F ATD++I++     A+  
Sbjct: 4   IKTQRDTLLSPLQSVSGIVEKRHTLPILSNVLLEKKGDALTFLATDIEIQITTSAAAEGG 63

Query: 62  ERAGATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFPVMT 121
           E  GA TV A  L +I+R LP+G  V+L  +  + RL V  G+S F+L TLP +DFP M 
Sbjct: 64  EGDGAVTVGARKLQDILRSLPEGTEVSLVLE--EKRLLVRGGKSRFTLQTLPADDFPRMA 121

Query: 122 T-TEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDGH 180
              +    F+      R+L  ++++A++ ++ RYYLNG+ +       G+ LR VATDGH
Sbjct: 122 IGNDDAKRFSVTQKQFRQLLAQTQYAMAAQDVRYYLNGLLLLT----EGKELRAVATDGH 177

Query: 181 RLA----RIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEI 236
           RLA     I+A+LP        +I+PRKTV EL +LL D +  + +++S  ++RFA   +
Sbjct: 178 RLAFASMEIEAELPRQE-----LILPRKTVLELNRLLADSDDALEITLSANQVRFAFGNV 232

Query: 237 TLTSKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRL 296
            L SK+IDG FPDY RVIP +    LE+  +   +++ R A +++E+ R V+L L  + L
Sbjct: 233 VLVSKLIDGKFPDYERVIPATLKNSLELGRTALLQSMVRAAILTNEKFRGVRLVLQGNSL 292

Query: 297 ILSVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMR 356
            +     +   A+EEL V Y  + L++GFN  Y+L++ + V  +     FN A    ++ 
Sbjct: 293 KVMAANAEQEEAQEELEVEYAGDSLDVGFNVGYVLDVLNNVSSDTVTLNFNDANSSALIT 352

Query: 357 EGSDSSAIYVVMPMRV 372
              +    YVVMPMR+
Sbjct: 353 VPGNDRFKYVVMPMRI 368