Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 371 a.a., DNA polymerase III subunit beta from Ralstonia sp. UNC404CL21Col

 Score =  228 bits (580), Expect = 3e-64
 Identities = 131/375 (34%), Positives = 209/375 (55%), Gaps = 12/375 (3%)

Query: 3   ISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQVE 62
           +   R  LLR +     +VERR+T+PILAN+LI  +G+ VSF +TD++I++         
Sbjct: 4   VKTSRDNLLRPLQIVSGIVERRHTLPILANLLITKQGERVSFLSTDIEIQITTHADCGAG 63

Query: 63  RAG-ATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFP-VM 120
               ATTV A  L +I+R +PDG +    +D    R+ V +G+S F+L TL  E+FP V 
Sbjct: 64  AGDIATTVAARKLVDILRAMPDGEVALTLNDK---RMTVQSGKSRFALQTLAAEEFPTVA 120

Query: 121 TTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDGH 180
             T++      P   L+ L     FA++ ++ RYYLNG+ + V    +G+ +  VATDGH
Sbjct: 121 EATDFGARITLPQKTLKHLLAMVHFAMAQQDIRYYLNGMLLVV----DGKQVMAVATDGH 176

Query: 181 RLARIDADL---PDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEIT 237
           RLA    +    P  A G   VI+PRKT+ EL++LLED +  ++V ++  +++F    I 
Sbjct: 177 RLAYCGVETGEQPAGAGGRQEVIIPRKTILELQRLLEDVDDPVSVQLASNQVKFTFGNIE 236

Query: 238 LTSKVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRLI 297
           L SK+++G FPD+ RVIP        +D +   +A+ R A +++++ + V+  LD + L 
Sbjct: 237 LISKLVEGKFPDFQRVIPKGYRNSFTIDRAFLQQALQRTAILTTDKFKGVRCMLDTNVLK 296

Query: 298 LSVNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMRE 357
           +S    D   A+EEL + Y  + L+IGFN  YLL++ + +  E        +    ++  
Sbjct: 297 ISSTNADQEEAQEELEIDYQGDALDIGFNVTYLLDVLANLKAEKVQVSLGDSNSSALITL 356

Query: 358 GSDSSAIYVVMPMRV 372
             D +  YVVMPMR+
Sbjct: 357 PDDDTFKYVVMPMRI 371