Pairwise Alignments

Query, 372 a.a., DNA polymerase III, beta subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 367 a.a., DNA polymerase III subunit beta from Burkholderia phytofirmans PsJN

 Score =  229 bits (585), Expect = 7e-65
 Identities = 133/373 (35%), Positives = 217/373 (58%), Gaps = 12/373 (3%)

Query: 3   ISIERATLLRAVSQAQSVVERRNTIPILANVLIEAEGDSVSFRATDLDIEVVDRVTAQVE 62
           +  ER  LLR +     +VERR+T+PILAN+LI   G  VSF +TDL++++  R    V 
Sbjct: 4   VKTERDNLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADFGVG 63

Query: 63  RAG-ATTVPAVTLHEIVRKLPDGALVALTHDTAKGRLEVSAGRSNFSLATLPREDFP-VM 120
               ATTV A  L +I+R +PDG +    +D    RL V +G+S F+L TL  ++FP V 
Sbjct: 64  GDSVATTVAARKLLDILRAMPDGQVTLTLNDK---RLTVQSGKSRFALQTLAADEFPTVA 120

Query: 121 TTTEYTCNFAAPAPVLRRLFDKSKFAISTEETRYYLNGVYMHVADGENGRSLRCVATDGH 180
              +Y  N   P    R+L     F+++ ++ RYYLNG+ + V DG+    L  VATDGH
Sbjct: 121 QAKDYGANLVVPQKTFRQLLGMVHFSMAQQDIRYYLNGMLL-VVDGDQ---LMAVATDGH 176

Query: 181 RLARIDADLPDAAEGMPGVIVPRKTVGELRKLLEDDEAQIAVSVSETKIRFATPEITLTS 240
           RLA     +  + +    VI+PRKT+ EL++LLED +  + + +++T+++F   ++ L S
Sbjct: 177 RLAFSSMKIEGSFQRQE-VIIPRKTILELQRLLEDIDDTLKIDIAQTQVKFTFGQVELVS 235

Query: 241 KVIDGTFPDYTRVIPVSNSRKLEVDASEFAKAVDRVATVSSERSRAVKLALDEDRL-ILS 299
           K+++G FPD+ RVIP S+  +  +   E  +++ R A ++S++ + V+  ++  +L I+S
Sbjct: 236 KLVEGKFPDFQRVIPKSHKNQFVIGREELQRSLQRAAILTSDKFKGVRCIIEPGQLKIMS 295

Query: 300 VNAPDSGAAEEELAVAYGDERLEIGFNAKYLLEIASQVDRENAVFLFNSAADPTMMREGS 359
            NA D   A+EEL +AY  + ++IGFN  YLL++ + +  +        A+   ++    
Sbjct: 296 TNA-DQEEAQEELEIAYDGDSVDIGFNVTYLLDVLANLKVDTLQVSLGDASSSALITIPE 354

Query: 360 DSSAIYVVMPMRV 372
           +    YVVMPMR+
Sbjct: 355 NDEFKYVVMPMRI 367