Pairwise Alignments

Query, 516 a.a., flagellin domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 401 a.a., flagellin D protein from Sinorhizobium meliloti 1021

 Score =  145 bits (365), Expect = 3e-39
 Identities = 112/383 (29%), Positives = 189/383 (49%), Gaps = 41/383 (10%)

Query: 1   MSSILTNNSAMVALQTLKSINSNLSKTQDEISTGKSVATAKDNAAIWSISKVMEADVKGF 60
           M+SILTN +AM ALQTL+ I+SN+ +TQ  +S+G  V TA DNAA WSI+  M +D    
Sbjct: 1   MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMAL 60

Query: 61  KAISESLSLGESTVAVARNASETVTDLLTEIKGKIVASQEENVDRAKIQTDIDALKEQIG 120
            A+ ++L LG + V  A    E   +++ EI+ K+VA+ E+ VD+AKIQ +I+ LK+Q+ 
Sbjct: 61  SAVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLT 120

Query: 121 SVISAAQFNGKNL----VNSYDQSSILSSLDRDSSGTVTANSISFTGQNLTSASGTLETA 176
           S+ +AA F+G+N     + +    S++ S  RDSSG V+  +I +     +    T+  A
Sbjct: 121 SIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGDA 180

Query: 177 SALDRIGTIDDAGTYTVGNGASLTNTANTT------DLVLANDLADSATLNISFG----- 225
             LD+I  +  A + T+    + T T  T       +L+ A    D  + N++       
Sbjct: 181 GILDKIYNVSQA-SVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAG 239

Query: 226 --DQQFSYTNTTGSAIAVADLSNIVAAGLSNLGVE--GVTTTSDGVDTVTIASTNKFEAI 281
             D   ++    G+ +   D++      + + G    GV TT  G   + + +    E I
Sbjct: 240 GIDYNGNFVKVEGTWVRAIDVAATGQEVVYDDGTTKWGVDTTVAGAPAINVVAPASIENI 299

Query: 282 AIQGSSSGAT-TVDVNGAGAGVEETLVARAETVSLGGAGNTGGVVNEGDGFQIALGGQAF 340
            I  ++  A     + G    +E+ + A   T +LG      G+  E             
Sbjct: 300 DITNAAQAANLDALIRGVDEALEDLISA---TSALGSISMRIGMQEE------------- 343

Query: 341 NYVAKDGDTLNDVATGLKRVLDA 363
            +V+K  D+++   +G+ R++DA
Sbjct: 344 -FVSKLTDSID---SGIGRLVDA 362



 Score =  105 bits (262), Expect = 3e-27
 Identities = 89/285 (31%), Positives = 126/285 (44%), Gaps = 44/285 (15%)

Query: 241 VADLSNIVAAGLSNLGVEGVTTTSDGVDTVTIASTNKFEAIAIQGSSSGATTVDVNGAGA 300
           V D S +V+    +  ++G +   D V    I          I   S  + T+ VN  G 
Sbjct: 151 VRDSSGVVSVKTIDYVLDGNSVLFDTVGDAGILDK-------IYNVSQASVTLPVNVNGT 203

Query: 301 GVEETLVARAETVSLGGAGNTGGVVNEGDGFQIALGGQAFN--YVAKDGDTLNDV---AT 355
             E T+ A A    +       G      G+ +  GG  +N  +V  +G  +  +   AT
Sbjct: 204 TTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAGGIDYNGNFVKVEGTWVRAIDVAAT 263

Query: 356 GLKRVLDAGGLE-GIEVKVNISDDPTIDPPTIQIDNDGATAVALTVDDGADGVASGGLVG 414
           G + V D G  + G++  V                  GA A+ +                
Sbjct: 264 GQEVVYDDGTTKWGVDTTVA-----------------GAPAINVVAP-----------AS 295

Query: 415 LDGIDVTTQEGAENA---LANIESLIETSIDAAAQFGSVQSRIETQSDFIGKLTDSLKSG 471
           ++ ID+T    A N    +  ++  +E  I A +  GS+  RI  Q +F+ KLTDS+ SG
Sbjct: 296 IENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSG 355

Query: 472 IGSLVDADMEEASARLQALQVQQQLGTQSLSIANQAPQNILALFR 516
           IG LVDADM E S RL+ALQ QQQL  QSLSIAN   +NIL LFR
Sbjct: 356 IGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFR 400