Pairwise Alignments

Query, 226 a.a., transcriptional regulator, GntR family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 238 a.a., transcriptional regulator. GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.9 bits (237), Expect = 6e-25
 Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 16/216 (7%)

Query: 9   MNLAKPIARPSLHAELVDRV----RELIIEGSLEPGTKIPEKELCQSFGVSRTPMREALK 64
           MN  K +A       L D++    +  II+G L  G+KI E+ L + +G+SR P REAL+
Sbjct: 1   MNKVKSLASEKSSTTLADQILVQIQTSIIKGELPAGSKINEQALAEKYGISRGPTREALQ 60

Query: 65  VLANEGLAVLEPNRGAWVSTVTMEELEETFPVIAALERLAGELACAHGSDAQIAHIRTRH 124
            L  + L V  P+ GA V+ +T+ EL + + + + LE +A ELA +  +  Q+A +    
Sbjct: 61  TLERQRLVVRAPHVGARVAQLTVSELNDLYQLRSVLEGMACELAASRITPEQLAKL---- 116

Query: 125 DDMMAC--FATRNRQAYFKANQDI--HDGILEAAGNEVLSQHHRVLGSRVKRARFLAN-- 178
           +D++A    A  N   YF+   D+  H  I++A+GN+ L +   ++G      R      
Sbjct: 117 EDLLAVQETALANGDTYFQEEGDVDFHYQIIQASGNKHLQE--TLIGGLYHLLRMYRYQC 174

Query: 179 ISDARWAQAVAEHEGIITALEARDGPLLGQLLSAHL 214
            +  R  +A+AEH  I+ A+  RDG L   L+  H+
Sbjct: 175 TNKNRPVKAIAEHRRIVEAIAQRDGELASLLMRRHI 210