Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 246 a.a., Flagellar motor component from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 30/250 (12%)

Query: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60
           ++ +IG+++ FV + GG    GG +  +L   P  + ++GG  +GA ++   ++     +
Sbjct: 3   VLSLIGLLLAFVAIVGGNFLEGGHISALLNG-PAALIVLGGT-LGAVLLQTPIAVFMRAM 60

Query: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLARQNPVGLEEHIE---DPAASNIFSKYPKI 117
              + +F  P       + +L +        ++  +GLE   E   DP A          
Sbjct: 61  SIGRWIFFPPR--IDLARGILMVTTWSNTARKEGLLGLEPVAETEPDPYA---------- 108

Query: 118 MADREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALG 177
              R+ + L+ D          +P  +  +LE  + +     +  +   +++    P +G
Sbjct: 109 ---RKGLQLLVDGA--------EPEVIRSILEVDLYTQESRDLRAAKVYESMGGYSPTIG 157

Query: 178 IVAAVLGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVE-EDA 236
           I+ AV+G+I  MG++  P + LG  I  A V T  GV  A  LV P   K+KSVV+ + A
Sbjct: 158 IIGAVMGLIHVMGNLADPSQ-LGSGIAVAFVATIYGVAFANLLVLPIGNKLKSVVQRQTA 216

Query: 237 HFYLLIREVL 246
           +  +L+  VL
Sbjct: 217 YREMLLEGVL 226