Pairwise Alignments

Query, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 289 a.a., flagellar motor protein MotA from Burkholderia phytofirmans PsJN

 Score =  202 bits (513), Expect = 9e-57
 Identities = 107/286 (37%), Positives = 176/286 (61%), Gaps = 3/286 (1%)

Query: 1   MIGIIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTL 60
           M   IG ++V   V G ++  GG +  +L+  PFE+  I GAA+GAFV+ N  S +K T+
Sbjct: 1   MFVAIGWLLVIGSVIGSFVGVGGHLPALLQ--PFELLCIFGAAIGAFVVSNPTSTLKKTI 58

Query: 61  KDVKKVFKGPTWLAQDYKDLLCLLFELIRLAR-QNPVGLEEHIEDPAASNIFSKYPKIMA 119
           K +   FKG  +  + Y +L+ LL+EL++ AR +  + LE  +  P  S IF KY  ++ 
Sbjct: 59  KAIPSCFKGGGYTKEKYLELIALLYELLQKARKEGMMSLEADVGAPEESVIFQKYSHVLE 118

Query: 120 DREAIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIV 179
           D   +D I D +R  +    +  +V++++++ + ++H  A   ++A+Q +ADGLPA GIV
Sbjct: 119 DHHLLDFIVDYLRMMSGGNVNVLEVQDLMDEELATHHAEASVAANAIQKMADGLPAFGIV 178

Query: 180 AAVLGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFY 239
           AAV+GV+ TMGS+  PP +LG++I GALVGTFLG+ LAYG +GP +  + +    +A  Y
Sbjct: 179 AAVMGVVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPY 238

Query: 240 LLIREVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEALKQLK 285
             ++ VL+A+L  +     +E GR+   +  RP+F +L++A++  K
Sbjct: 239 QCVKAVLLASLSGYAPPIAVEFGRKVLFTADRPSFQELDDAVRATK 284