Pairwise Alignments

Query, 257 a.a., type III secretion system inner membrane R protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 261 a.a., Flagellar biosynthesis protein FliR from Pseudomonas syringae pv. syringae B728a

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 11/231 (4%)

Query: 16  FILALLRIGAAMAFLPAFGERAVPLRIKLVLTLALTALVLPTLLATGAPPLER-PADWVL 74
           F+L L RI A +  +P  G   VP R+++ L +A+T +V P L A   PP++      +L
Sbjct: 19  FMLPLFRIIALLMTMPIIGTTLVPRRVRMYLAVAITVVVAPALPAM--PPVQALDLSALL 76

Query: 75  AGGAEVVSGLFLGFTFRLMVFALQVAGTIAAQSTSLAQVFGGAVTPD---PQPALGNIFL 131
             G +++ G  +G + +L      +AG I   ST +   F   V P        +G  F 
Sbjct: 77  LIGEQIIIGAGMGLSLQLFFHIFVIAGQII--STQMGMGFASMVDPTNGVSSATIGQFFT 134

Query: 132 MAGLALAALSGLHVHLTEAFLLSFLLLPVGNFPNSDIISAWAIAD-VSRMFVVGFTLSAP 190
           M    L      H+ + E  + SF  +PVG+     + + W +A+ +  +   G  L  P
Sbjct: 135 MLVTLLFLAMNGHLVVLEVLVESFTTMPVGS--GLLVNNFWELANGLGWVLASGLRLVLP 192

Query: 191 FVAAAMLYNLALGAINRAMPQLMVAFVGAPALTLGGLALAALSVPFLLTHW 241
            + A ++ N+A G + RA PQL +  +G P   + G+ +  +++  +L  +
Sbjct: 193 AITALLIINIAFGVMTRAAPQLNIFSIGFPLTLVLGMVILWMTMGDMLNQY 243