Pairwise Alignments

Query, 257 a.a., type III secretion system inner membrane R protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 256 a.a., flagellar biosynthetic protein FliR from Dyella japonica UNC79MFTsu3.2

 Score = 75.1 bits (183), Expect = 1e-18
 Identities = 67/216 (31%), Positives = 98/216 (45%), Gaps = 11/216 (5%)

Query: 19  ALLRIGAAMAFLPAFGERAVPLRIKLVLTLALTALVLPTLLATGAPPLERPADWVLAGGA 78
           A+ R+       P FG   +P RI++ L + LT LVL  L      P+       +AG  
Sbjct: 19  AMGRVAGLFLVAPVFGATVLPARIRVGLIVLLT-LVLAPLAPARVDPMSSTGVSTMAG-- 75

Query: 79  EVVSGLFLGFTFRLMVFALQVAGTIAAQSTSLAQVFGGAVTPD---PQPALGNIFLMAGL 135
           +V+ G  +GF  RL   A+   G + AQS SL   F   V P      P L   +L+   
Sbjct: 76  QVLIGAAVGFVLRLTFEAVAFGGQLVAQSMSLG--FAEVVNPQGGGSSPVLNQFYLLLVT 133

Query: 136 ALAALSGLHVHLTEAFLLSFLLLPVG-NFPNSDIISAWAIADVSRMFVVGFTLSAPFVAA 194
            L      H+ L E    SF  LP G    + D + A A+    ++F     ++ P + A
Sbjct: 134 LLFLAMDGHLRLIELLADSFRTLPPGAGAISPDGLHAVALFG-GQLFAGAVRVALPAMTA 192

Query: 195 AMLYNLALGAINRAMPQLMVAFVGAP-ALTLGGLAL 229
            ++ N+  GAI+RA P + +  VG P  L LG +AL
Sbjct: 193 LLVVNMGFGAISRAAPSMNLFAVGFPITLCLGFIAL 228