Pairwise Alignments

Query, 257 a.a., type III secretion system inner membrane R protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 264 a.a., type III secretion system export apparatus subunit SctT from Dyella japonica UNC79MFTsu3.2

 Score = 69.3 bits (168), Expect = 8e-17
 Identities = 62/217 (28%), Positives = 89/217 (41%), Gaps = 8/217 (3%)

Query: 10  GDVFPVFILALLRIGAAMAFLPAFGERAVPLRIKLVLTLALTALVLPTLLATGAPP---L 66
           GD      L L RI AA   LP      VP  ++    ++L  L  P  LA  A P   +
Sbjct: 11  GDQLTGVALTLPRIVAAFLVLPLMSSETVPALVRNSFYVSLAILAYP--LAAAASPSMTV 68

Query: 67  ERPADWVLAGGAEVVSGLFLGFTFRLMVFALQVAGTIAAQSTSLAQVFGGAVTPDPQPAL 126
              A+W+   G EV  GL +GF F L+ +AL  AG +       +           Q  L
Sbjct: 69  MTGANWIAVLGKEVFLGLLIGFCFGLVFWALGAAGAVIDTKAGSSMSMDMDPIAGQQSTL 128

Query: 127 GNIFLM-AGLALAALSGLHVHLTEAFLLSFLLLPVGNF--PNSDIISAWAIADVSRMFVV 183
            ++FLM     L  +SG      +  + S+ L PV +   P       + I   + +   
Sbjct: 129 TSVFLMQVATWLFMVSGAFTVFLDLLMSSYALWPVASVLPPLKAGGMDFFIGQFNYLMTA 188

Query: 184 GFTLSAPFVAAAMLYNLALGAINRAMPQLMVAFVGAP 220
              LSAP +    L ++ALG +NR   QL V  +  P
Sbjct: 189 VLVLSAPALVVMSLVDIALGLVNRYAQQLNVFALAMP 225