Pairwise Alignments

Query, 257 a.a., type III secretion system inner membrane R protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 260 a.a., flagellar biosynthetic protein FliR from Paraburkholderia bryophila 376MFSha3.1

 Score = 94.4 bits (233), Expect = 2e-24
 Identities = 76/244 (31%), Positives = 118/244 (48%), Gaps = 20/244 (8%)

Query: 16  FILALLRIGAAMAFLPAFGERAVPLRIKLVLTLALTALVLPTLLATGAPP----LERPAD 71
           F+   +RI A +A  P  G R++PLR+K+ L   +T +V PTL   GA P          
Sbjct: 16  FLWPFVRILALVATAPVLGNRSLPLRVKIGLAAFVTIIVAPTL---GALPQVTVFSAEGV 72

Query: 72  WVLAGGAEVVSGLFLGFTFRLMVFALQVAGTIAAQSTSL--AQVFGGAVTPDPQPALGNI 129
           W++    + + G+ LG T +++  A+   G        L  A  F    +   Q     +
Sbjct: 73  WIIVN--QFLIGIALGMTMQIVFQAISATGDFVGLGMGLGFATFFDAQASSSSQVLSSYM 130

Query: 130 FLMAGLALAALSGLHVHLTEAFLLSFLLLPVGNFPNSDIISA--W-AIADV-SRMFVVGF 185
             +A L    + G H+ +  A L SF  LPV    +++I+ +  W  +A+  S +F  G 
Sbjct: 131 NTIAMLVFLVIDG-HLQMVSALLASFNSLPV----SANILGSPGWRTLANFGSTIFSAGL 185

Query: 186 TLSAPFVAAAMLYNLALGAINRAMPQLMVAFVGAPALTLGGLALAALSVPFLLTHWWYLF 245
            LS P VAA ++ NLALG +NRA PQ+ V  +G P   L G+ L  L +P ++  +  LF
Sbjct: 186 LLSLPVVAALLITNLALGILNRAAPQIGVFQIGFPLTMLIGMLLLQLMIPNMIPFFGRLF 245

Query: 246 EASI 249
              I
Sbjct: 246 AVGI 249