Pairwise Alignments

Query, 227 a.a., transcriptional regulator, Crp/Fnr family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 272 a.a., cAMP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 60/221 (27%), Positives = 119/221 (53%), Gaps = 3/221 (1%)

Query: 3   LNDSAIAKQAKFFTRMDKTVADKILAGARPLALNRGEPVFVQGEPPRAIYLVIEGWLKLS 62
           +  S I  Q   F+ ++    +++LAGA  ++L+  E +F + +P +  YLV++G L+L 
Sbjct: 5   IQTSQIIHQHHLFSPLEPRQLEQLLAGAGRISLSAQEHLFHRQDPAKRFYLVLKGNLQLY 64

Query: 63  RLSSNGTEAVFGVFTRGDTLGDPLP-SSDMGHPVSCHAVTPGRVLEIRADALLARMRQDP 121
             S+ G   V  V     +  + L  + +  +PVS  AV    ++   A+A LA ++Q P
Sbjct: 65  ITSAQGQLKVLEVVRPNHSFAEALIFNQEPFYPVSAQAVQACELISFDAEAYLAILKQSP 124

Query: 122 DVAEALLSSAFDHVTNLFAQVETLVARNGAQRVAEFLVSLA-PVREGACTLSLPYEKELV 180
           D   A++++    +     ++E L  +N   R+  FL+  + P  + +  L+L   K  +
Sbjct: 125 DACIAVMAAMSMRLHKDIQEIENLSLQNAENRLLMFLLRHSKPSGDNSGMLTLDVPKRTL 184

Query: 181 AGRLGLKPESLSRILRQLRAQGVV-NTRASVRIEDVARLAE 220
           A RL ++PE+ SR+++++ ++G++  +R  + I D++RL E
Sbjct: 185 ASRLSIQPETFSRLIKKMNSEGMIEESRGLINIPDLSRLYE 225