Pairwise Alignments

Query, 313 a.a., ApbE family lipoprotein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 347 a.a., thiamin biosynthesis lipoprotein ApbE (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.5 bits (153), Expect = 7e-15
 Identities = 73/273 (26%), Positives = 124/273 (45%), Gaps = 18/273 (6%)

Query: 40  GTALGADASAQLVGLDPASASDILVG-LQRELRRLETLFSLYRPESQVSRLNR---EGRL 95
           G+ +G     ++V  +    + +L   +   L ++    S YRP S++SR N+   E  +
Sbjct: 42  GSTMGTTYHIKVVPNEHMPTAQLLQAEIDLALEQVNNQMSTYRPNSELSRFNQLPLEQSV 101

Query: 96  DAPAPELLEVLAQCDALHRGTGGAFDPTTQPLFAT--FAQAAAAGRTPSGDEVARARAAV 153
           +  +P+ ++V+ +   L+  T  A D T  PL     F       + PS  E+  A+A  
Sbjct: 102 EV-SPDTIKVVREGMRLYDVTDKALDITLGPLVNLWGFGPDKRPTKVPSQAEIDAAKAKT 160

Query: 154 GWHHLRIGTDSVAFARPGGQLTLNGIAQGYISDRIAAWLRDRGLTDILLE-AGEIVALGH 212
           G   L I  + +        + L+ IA+G+  D++A+ L     T  L+E  GE+   G 
Sbjct: 161 GIRELSIEGNLLRKHNAHLYVDLSSIAKGFGVDKVASILDKYQATGYLVEIGGELSIKGT 220

Query: 213 GPDATPWRCRI---ADAAGTSRRELRLRDRAIATSAP--DAMTLAGAR--HIFDPASGRS 265
             DA+ WR  I    D     ++ +     ++ATS    +    AG R  HI DP +G  
Sbjct: 221 KGDASSWRVAIEKPTDEGIAVQQVIEPGTMSMATSGDYRNYYEEAGQRFTHIIDPRTGLP 280

Query: 266 ADRGRMTSVSA--PAAMLADGLSTALCVLPPES 296
            +  ++ SV+      M ADG +TA+ VL  E+
Sbjct: 281 INH-KLASVTVLHNECMTADGFATAMMVLGTEA 312