Pairwise Alignments

Query, 222 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 250 a.a., transcriptional regulator FNR from Vibrio cholerae E7946 ATCC 55056

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 6/193 (3%)

Query: 29  RPRHFAKDEALYHFGDSSRGVYGIVAGNVSVSIPNDVGAAQTVYLATPGFWIGDAALFSD 88
           R +   K + L+  GD  R +Y I +G +      + G  Q       G  +G  A+  D
Sbjct: 48  RKKPIQKGQELFKAGDELRSLYAIRSGTIKSYTITEQGDEQITAFHLAGDLVGFDAITGD 107

Query: 89  QTRLVTVIAETEVDALFLPKAQLDDLVREHPDLLRDFYALSHLNLNVALSLIANLVTPNA 148
           Q        ET +    +P   LDDL  + P L +    L    +     +I  L   NA
Sbjct: 108 QHPSFAQALETSM-VCEIPYEILDDLSGKMPKLRQQIMRLMSNEIKGDQEMILLLSKKNA 166

Query: 149 AQRLAAFLLNV----DERQVNPGDW-IQVAQDRLASMVALSTPTVQRHLRNLSAAGLVEI 203
            +RLAAFL N+     +R  +P ++ + + +  + + + L+  T+ R L     + ++ +
Sbjct: 167 EERLAAFLYNLSTRFSQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSEILSV 226

Query: 204 GYGRMRVIERAAL 216
               + ++  A L
Sbjct: 227 KGKYITILNHAEL 239