Pairwise Alignments

Query, 222 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 250 a.a., fumarate/nitrate reduction transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 6/193 (3%)

Query: 29  RPRHFAKDEALYHFGDSSRGVYGIVAGNVSVSIPNDVGAAQTVYLATPGFWIGDAALFSD 88
           R +   K E ++  GDS + +Y I +G +      + G  Q       G  IG   + ++
Sbjct: 48  RKKPIQKGEQIFKSGDSLKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDVIGFDGIHAN 107

Query: 89  QTRLVTVIAETEVDALFLPKAQLDDLVREHPDLLRDFYALSHLNLNVALSLIANLVTPNA 148
             +      ET +    +P   LD+L    P L +    L    +     +I  L   NA
Sbjct: 108 THQSFAQALETSM-VCEIPFNTLDELSGSMPKLRQQIMRLMSNEIMSDQEMILLLSKKNA 166

Query: 149 AQRLAAFLLNVDERQVNPG-----DWIQVAQDRLASMVALSTPTVQRHLRNLSAAGLVEI 203
            +RLAAF+ N+  R  N G       + + +  + + + L+  T+ R L     + L+E+
Sbjct: 167 EERLAAFIANLATRYGNRGFSQREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSELIEV 226

Query: 204 GYGRMRVIERAAL 216
               + +I+ A L
Sbjct: 227 KGKYITIIDFAGL 239