Pairwise Alignments

Query, 222 a.a., cyclic nucleotide-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 211 a.a., cAMP-regulatory protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.1 bits (126), Expect = 4e-12
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 6/178 (3%)

Query: 39  LYHFGDSSRGVYGIVAGNVSVSIPNDVGAAQTVYLATPGFWIGDAALFSDQT-RLVTVIA 97
           L H G+ S  +Y IV G+V+V I ++ G    +     G +IG+  LF +Q  R   V A
Sbjct: 31  LIHAGEDSDTLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEQAERTAWVRA 90

Query: 98  ETEVDALFLPKAQLDDLVREHPDLLRDFYALSHLNLNVALSLIANLVTPNAAQRLAAFLL 157
           +   +   +   +   L++ +P++L    +     L      + +L   + A R+A  LL
Sbjct: 91  KQACEIAEISYKKFKQLIQVNPEILMKLSSQMAYRLQSTSQKVGDLAFLDVAGRIAQTLL 150

Query: 158 NV----DERQVNPGDWIQVAQDRLASMVALSTPTVQRHLRNLSAAGLVEIGYGRMRVI 211
           ++    D      G  I++ +  +  +V  S  TV R L+ L    L++  +G+  V+
Sbjct: 151 HLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLIQ-AHGKTIVV 207