Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  454 bits (1167), Expect = e-132
 Identities = 273/592 (46%), Positives = 347/592 (58%), Gaps = 36/592 (6%)

Query: 3   YTAPLNDLRFLLDHVVGFDAVQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGDLH 62
           Y APL D+R++L  +    ++     + E T D+ + +L EAAK+CE  L PL R GD  
Sbjct: 4   YKAPLRDMRYVLYDLFDGASLTTLPGYEEFTADLIDPVLEEAAKICEDVLQPLNRPGDEE 63

Query: 63  PARLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACLSL 122
              LENGVVRT  GF E YR    GGW  ++ DPA+GG GLP  + T + EM+ +A LS 
Sbjct: 64  GCVLENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICAANLSF 123

Query: 123 QIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAVPK 182
            + P ++ G   AL+   ++  KA YLP L  G W GTM LTEPQ G+D+G L TKAVP 
Sbjct: 124 GMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRTKAVPD 183

Query: 183 GDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAGNPG 242
           G+G Y ITG KI+IS GD+D T N+ HLVLARLPD   G KGISLFLVP+ L    G  G
Sbjct: 184 GEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTEEGALG 243

Query: 243 VANALKVVSLEHKLGLHGSPTAVMQYEGATGWLVGPEHGGMRAMFTMMNNARLGVGVQGI 302
             NA+   +LEHK+G+  S T V+ ++ ATGWL+G  H GMRAMF MMN ARLGVGVQG+
Sbjct: 244 DRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGVGVQGL 303

Query: 303 GVAEAAYQHALAHARDRKQGQTPVA------DADSILAHADVRRMVMTMRAEVFAARAIA 356
           G+AEA+YQ A+A+ARDR QG++P         AD ++ H DVRRM++T RA V   RA+A
Sbjct: 304 GLAEASYQGAVAYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEGGRALA 363

Query: 357 LSTAVATDMHHATGAESWAARA----ALLTPICKAYGTDTGIRVADLGLQVHGGMGVIEE 412
               +A D  H  G  +  A A    AL+TP+ KA  TD G    +LG+QV GG G I E
Sbjct: 364 AWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGHGYIRE 423

Query: 413 TGAAQYLRDVRVTAIYEGTNGIQAMDLVGRKLAD-GGEAMSRLLDEIEALAESARGSLPE 471
            G  QY+RD R+T IYEGTNGIQA+DLVGRKL +  G  + R    +    E AR     
Sbjct: 424 HGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADYIE-ARLDDDT 482

Query: 472 LAEPVWQACETLRETTEALVAETRLNARFGGAQPYLMAAA-----RVLG--GHAHLAAAI 524
           LAE V    +T     +A    T   AR G  +P   AAA     R+LG    A+L A +
Sbjct: 483 LAEFVGPLAKTFVRLQQA----TAQVARVGMTKPAEAAAAATDYQRLLGFTALAYLWARM 538

Query: 525 AE-------------GGRGPRSALARFFVGRLLPEHGALAAQALAGDKDLYA 563
           AE                  + A AR F+ RLLP+   L A  +AG + L A
Sbjct: 539 AELSLPKAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSLEA 590