Pairwise Alignments

Query, 571 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 589 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  485 bits (1249), Expect = e-141
 Identities = 284/586 (48%), Positives = 354/586 (60%), Gaps = 18/586 (3%)

Query: 3   YTAPLNDLRFLLDHVVGFDAVQATDRFAETTPDVTEAILTEAAKLCEGELAPLQRAGDLH 62
           Y AP+ D+   L    G   V       +   D+ EA+L+EA KL    LAPL   GD  
Sbjct: 4   YRAPIADIMLAL-RATGLAEVLTLPGAEDVCEDLVEAVLSEAGKLAADVLAPLNAPGDRQ 62

Query: 63  PARLENGVVRTSPGFAEGYRAIAAGGWVGMSADPAYGGMGLPMALATCMNEMMSSACLSL 122
            +RLENG VRT  GFAE Y     GGW G+  DP YGG GLP  + T +NE+  +A +S 
Sbjct: 63  GSRLENGTVRTPDGFAEAYGHFVDGGWTGVPFDPEYGGQGLPWMVGTALNEIWQAANMSF 122

Query: 123 QIAPMMTQGQIEALEAHASDALKALYLPRLTSGDWVGTMNLTEPQAGSDVGALTTKAVPK 182
            +AP+++ G IE L++H S   KA +LP+L SG+W GTMNLTEPQAGSD+ A+ TKAV  
Sbjct: 123 GLAPLLSAGAIELLDSHGSAEQKAQWLPKLISGEWTGTMNLTEPQAGSDLAAVRTKAVAA 182

Query: 183 ---GDGTYAITGQKIYISWGDNDFTGNVCHLVLARLPDGAPGTKGISLFLVPRHLPDAAG 239
              GDG Y I G KI+I++GD+D   N+ H+VLAR+ D  PG KGISLF+VP+ LP A G
Sbjct: 183 PDLGDGVYRIFGSKIFITYGDHDLAPNIVHMVLARISDAPPGIKGISLFIVPKTLPTAEG 242

Query: 240 NPGVANALKVVSLEHKLGLHGSPTAVMQY---EGATGWLVGPEHGGMRAMFTMMNNARLG 296
             G AN L+ VSLE KLG+H SPT VM +    GA G+LVG  + G+  MFTMMNNARLG
Sbjct: 243 GLGAANDLRCVSLEDKLGIHASPTCVMAFGDQGGAVGYLVGAANHGIEYMFTMMNNARLG 302

Query: 297 VGVQGIGVAEAAYQHALAHARDRKQG---QTPVADADSILAHADVRRMVMTMRAEVFAAR 353
           VGVQG+G AE A Q A+ +AR R QG         + SI+ H DVRRM+MTMRA   AAR
Sbjct: 303 VGVQGVGQAERATQAAVEYARARVQGGDASVRGGPSVSIIHHPDVRRMLMTMRARTQAAR 362

Query: 354 AIALSTAVATD--MHHATGA--ESWAARAALLTPICKAYGTDTGIRVADLGLQVHGGMGV 409
            I   TA A D    HA  A     A RAALLTPI KA+ T+ GI VA+LG+QVHGG G 
Sbjct: 363 LITYLTAAALDTAKRHADAALRAEAATRAALLTPIAKAWSTEAGIDVANLGIQVHGGQGY 422

Query: 410 IEETGAAQYLRDVRVTAIYEGTNGIQAMDLVGRK-LADGGEAMSRLLDEIEALAESARGS 468
           IE+ GAAQ+LRD R+ +IYEGTNGIQA+DLVGRK L DGG A   L  E+ A+AE +  +
Sbjct: 423 IEDAGAAQFLRDARIASIYEGTNGIQAIDLVGRKVLRDGGVAARALASELAAIAERSAAT 482

Query: 469 LPELAEPVWQACETLRETTEALVAETRLNARFGGAQPYLMAAARVLGGHAHLAAAI---A 525
           LP L  P+      L    E +++     +    A P+L     VLGG   +  A+   A
Sbjct: 483 LPGLQAPLADGLADLEAALEWVLSHPDAVSAQAAATPFLTLFGLVLGGGLLVEQAVIATA 542

Query: 526 EGGRGPRSALARFFVGRLLPEHGALAAQALAGDKDLYALDPEDLVA 571
           E  +   +  A FF+  LLP      A   AG  DL AL  +  VA
Sbjct: 543 EAEKAAAATTAGFFLRHLLPATAGHLATIRAGAADLVALHEDAFVA 588