Pairwise Alignments

Query, 431 a.a., diaminopimelate decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  391 bits (1004), Expect = e-113
 Identities = 205/411 (49%), Positives = 271/411 (65%), Gaps = 5/411 (1%)

Query: 1   MDHFTYIKGQLHAEDVPVSAIADAVGTPFYVYSTATLTRHFKLFDEALSWGPHLVCFAMK 60
           MDHF Y + +L AE+  V+ +A   GTP YVYS ATL RH+  FD A++  PHL+C+A+K
Sbjct: 1   MDHFLYREERLFAEECDVAGLAAEHGTPLYVYSRATLERHWHAFDGAVASHPHLICYAVK 60

Query: 61  SNSNQAILKLLADLGAGMDVVSGGEYARARAAGVPGDRIVFSGVGKTADEMRMALTGGIR 120
           +NSN A+L +LA LG+G D+VSGGE +R   AG    ++VFSGVGKT  EM +AL  GI 
Sbjct: 61  ANSNLAVLNVLARLGSGFDIVSGGELSRVLEAGGDPAKVVFSGVGKTVAEMELALNTGIM 120

Query: 121 QFNVESEPEMQRLSAVAQGLGMQAPITIRVNPDVDAKTHEKIATGKSENKFGIPISRARE 180
            FN+ES  E++ L+ VA  LG  AP+++RVNPDVDA TH  I+TG  ENKFGIP+  A  
Sbjct: 121 CFNLESGAELELLNEVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIPMEEAEA 180

Query: 181 VYAQAARLPGIKVIGIDVHIGSQLTELEPFELAYAKVAELTRHLRADGHEITRLDLGGGL 240
           ++A+AA LP + V G+D HIGSQLTEL+PF  A  ++  L   L   G  I   D+GGGL
Sbjct: 181 LFARAAALPNLAVKGVDCHIGSQLTELKPFLDAMDRMLALIDRLAEQGIVIEHFDVGGGL 240

Query: 241 GIPYARTNEAPPLPTDYGALIQRTVGDLGCEIEIEPGRLISGNAGLLVSEVIYVKQGEDR 300
           G+ Y    E PP P  Y A I   +     ++  EPGR I+ NAG+ V++V+Y K   D+
Sbjct: 241 GVTY--NGETPPHPDVYAAAILEKLNGRPLKLIFEPGRAIAANAGIFVTQVLYTKDNGDK 298

Query: 301 QFLILDAAMNDLIRPSMYGAYHDIVPVREAAPGTPTTPYDIVGPVCESGDTFAKSREMVP 360
           +F+I+D AMNDLIRPS+YGA+ +I+P        PTT  D+VGPVCE+GD   K RE+  
Sbjct: 299 RFVIVDGAMNDLIRPSLYGAWQNIIPA--VKTNEPTTRCDVVGPVCETGDFLGKDRELA- 355

Query: 361 LTEGDLVAFRSAGAYGAVMASEYNTRPLIPEVLVHGDQFAVIRQRPSFDEI 411
              GDL+  RSAGAYG  MAS YNTRP   E++V GD+  V+R+R    ++
Sbjct: 356 AGSGDLLVVRSAGAYGFTMASNYNTRPRAAELMVDGDKAYVVREREKLSQL 406