Pairwise Alignments

Query, 223 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 359 a.a., methionine ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  134 bits (338), Expect = 2e-36
 Identities = 86/225 (38%), Positives = 132/225 (58%), Gaps = 9/225 (4%)

Query: 1   MITLDNVAFRYGDR--PLFGGVSLDVQPGDFYFLTGPSGAGKTTLVRLCYLDLAPEDGTV 58
           +I +++++  + D   P+   VSL ++ G+ + + G SGAGK+TLVR   L   P  G V
Sbjct: 6   VIRIEHLSKTFSDAAGPVLDDVSLTIRRGEIHGIIGRSGAGKSTLVRCINLLERPSAGRV 65

Query: 59  TCFGKPGTTLARDEIADMRQRIGVVHQDCRFLDHLSVADNIALPVSVAG--RAVSEGDLS 116
              G+  T+L    + + R+ IG++ Q    L   +VA N+ALP  VAG  RA     + 
Sbjct: 66  IVSGREITSLRGRALRNARRDIGMIFQHFNVLSSHTVAGNVALPFKVAGLPRAEIARRIP 125

Query: 117 ELLKWVGLSGRADARPPELSGGERQRAALARAVMMDPDVILADEPTGNIDWEMSQRLLTL 176
            LL+ VGL+ +ADA P ELSGG++QR  +ARA+ +DP V+L DE T  +D E + ++L L
Sbjct: 126 PLLELVGLAHKADAYPSELSGGQKQRVGIARALALDPSVLLCDEATSALDPETTDQILAL 185

Query: 177 LVELNR-MGKAILLATHDMALIRQAKTMTTARVLRLAGGTLQQAG 220
           L ++NR +G  I+L TH+M ++R   T    RV  L  G + + G
Sbjct: 186 LRDINRKLGLTIVLITHEMHVVRDIAT----RVAVLDHGRVVEEG 226