Pairwise Alignments

Query, 223 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 218 a.a., lipoprotein releasing system ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  130 bits (326), Expect = 3e-35
 Identities = 76/222 (34%), Positives = 127/222 (57%), Gaps = 9/222 (4%)

Query: 1   MITLDNVAFRYGDRPLFGGVSLDVQPGDFYFLTGPSGAGKTTLVRLCYLDLAPEDGTVTC 60
           MI L+ +   +G   +  G+ L++  G+   + GPSGAGKTTL+++      P+ GTV  
Sbjct: 1   MIKLEGITKSFGSLQVLKGIDLEINKGEIVSIVGPSGAGKTTLLQIMGTLDEPDAGTVAI 60

Query: 61  FGKPGTTLARDEIADMRQR-IGVVHQDCRFLDHLSVADNIALPVSVAGRAVSEGD--LSE 117
            G   + +   E++  R + IG V Q  + L   +  +N+ +P  +AG +  E +    E
Sbjct: 61  DGTVVSRMKEKELSAFRNKNIGFVFQFHQLLPEFTALENVMIPAFIAGVSSKEANERAME 120

Query: 118 LLKWVGLSGRADARPPELSGGERQRAALARAVMMDPDVILADEPTGNIDWEMSQRLLTLL 177
           +L ++GL+ RA  +P ELSGGE+QR A+ARA++  P VILADEP+G++D    + L  L 
Sbjct: 121 ILAFMGLTDRASHKPNELSGGEKQRVAVARALINHPAVILADEPSGSLDTHNKEDLHQLF 180

Query: 178 VEL-NRMGKAILLATHDMALIRQAKTMTTARVLRLAGGTLQQ 218
            +L +R+G+  ++ THD  L +      T R + +  GT+++
Sbjct: 181 FDLRDRLGQTFVIVTHDEGLAK-----ITDRTVHMVDGTIKK 217