Pairwise Alignments

Query, 427 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 339 a.a., flagellar motor protein MotA from Rhodopseudomonas palustris CGA009

 Score =  183 bits (465), Expect = 6e-51
 Identities = 103/229 (44%), Positives = 144/229 (62%), Gaps = 3/229 (1%)

Query: 13  SRPTRQLLLMLLVLVLVGIGGWVAYPRVAPIFLANPYLNGVIVLVFVVGLMSCLAQLYQL 72
           S P   L+ ML+ LVL  +   V Y ++   F+ANP LNG+I  V V+G++    Q+ +L
Sbjct: 19  SSPRIFLVRMLVFLVLCALIVVVLYKQILAAFMANPGLNGLICAVLVIGIVLAFRQVIRL 78

Query: 73  SAATRWIEGFANNVPTATRDTAPRLVGTLANLLGA-RKARMQLSANSSRSILDSVATRID 131
                W+  F  N P    D  P L+  +A +LG  R  R+ +S  + R +LDS+ATR+D
Sbjct: 79  YPEVAWVNNFRINDPGLALDRRPSLLAPMAAMLGGERSGRIAISPQTMRHLLDSIATRLD 138

Query: 132 EARDITRYIVNLLIFLGLLGTFYGLATTVPAVVDTIRSLDPSEGEGGVAVFSRLMTGLEA 191
           EARDI+RY+  LL+FLGLLGTF+GL  TV ++   I SL  + G+ G ++F  L  GL A
Sbjct: 139 EARDISRYMTGLLVFLGLLGTFWGLIETVGSIGGVIGSLKVT-GDAG-SLFDTLKEGLAA 196

Query: 192 QLGGMGTAFASSLLGLAGSLVVGLLELFVGHGQNRFYRELEEWLSTITK 240
            LGGMG +F+SSL GLAGSLV+G L+L     QNRFY +LE+WL++  +
Sbjct: 197 PLGGMGISFSSSLFGLAGSLVLGFLDLQSSQAQNRFYTDLEDWLASTVR 245