Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 955 a.a., DNA polymerase from Azospirillum brasilense Sp245

 Score =  979 bits (2531), Expect = 0.0
 Identities = 525/943 (55%), Positives = 659/943 (69%), Gaps = 22/943 (2%)

Query: 4   GKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVA 63
           G G  L+L+DGS FIFRA+HALP L R  DG PV AV GF NML + +   A    + VA
Sbjct: 21  GDGSGLYLVDGSGFIFRAFHALPMLNRP-DGTPVNAVLGFSNMLLKLL---ADLKASAVA 76

Query: 64  VIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIA 123
           V+FD     FRN+ Y +YKA+R   PE+L+PQ  L R ATEAF + C E+EG+EADD+IA
Sbjct: 77  VVFDSKRLNFRNEFYPEYKAHRPEPPEELKPQFALIREATEAFCLPCLELEGYEADDLIA 136

Query: 124 TLACQAREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDV 183
           T A  A EAG   TI+SSDKD+MQLV  GV MLD +KNK I  D VFEKFGV PDRVVDV
Sbjct: 137 TYARLANEAGREVTIVSSDKDMMQLVRPGVRMLDPLKNKPIGPDEVFEKFGVAPDRVVDV 196

Query: 184 QALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQTLIEHRAQIEL 243
           QALAGDSVDNVPG PGIG+KTAA LI EYG LE LL RAGEIKQP RRQ LI+   Q  +
Sbjct: 197 QALAGDSVDNVPGVPGIGVKTAAQLITEYGDLESLLARAGEIKQPARRQKLIDFAEQARI 256

Query: 244 SKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEA------ 297
           S+RLV LD        +E+L VR+P+ + L+ FL    FRT+  R+   +  +       
Sbjct: 257 SRRLVLLDDHAPPPKPLEELRVREPDHQKLIDFLRAQGFRTIVSRVEAEMRKDGTIADGA 316

Query: 298 -PAVPEPAATTASPEAEEHPPLSASE-HVTIRDAETLQSWIDAIHARGVVAVDTETTGLN 355
            P+   PAA   +P +   PP    + +  ++D + L  W++     GV+AVDTET  L 
Sbjct: 317 VPSSATPAAEVGAPRSRPAPPTDVEQRYELVQDLDALAVWLERARTTGVLAVDTETNSLT 376

Query: 356 EMRADLVGVSLCVDPGRAAYLPLAHK-DGGGADDLFGGEAKLAEGQLDFETALGMLKPVL 414
              A LVG+SL  +PG A Y+PLAH+     A      E   A  Q+  E AL  LK VL
Sbjct: 377 PATATLVGISLATEPGLACYIPLAHQAPNAAASGELSFETPEAPKQIPAEDALKALKEVL 436

Query: 415 EDPAVLKIGQNMKYDAKILARNGITVAPIDDTMLLSYALHAGLHGHGMDALSERYLDHTP 474
           EDPA+LKIG N K+D ++ AR+G+ V+P+DD+ML+SY L  G HGHGMD L+E +L HT 
Sbjct: 437 EDPAILKIGHNFKFDHQLFARHGVRVSPVDDSMLISYVLEGGAHGHGMDELAELHLAHTT 496

Query: 475 IPIKTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLHLAQVTRVYEWMER 534
           IP K + GTGK+ ITFD VP+++A  YAAEDA+ITLRLW+ LKPRL   ++  VYE +ER
Sbjct: 497 IPYKEVCGTGKNQITFDRVPLDKALAYAAEDADITLRLWRALKPRLVDERMVTVYETLER 556

Query: 535 PMVPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILF 594
           P+VPV+A+ME  GI+VDR  L+R+S   A +MA +E E+H+ AG SFN+GSP QLGEILF
Sbjct: 557 PLVPVIADMESCGIRVDRAALARLSQDLAVRMAEIEKEVHQHAGRSFNIGSPKQLGEILF 616

Query: 595 EKMGFEGGKTGKSGKYSTPADVLEDLATE-HDLPRRVLDWRQLSKLKSTYTDALQDHINP 653
           ++M    GK GK+G YST + VLE+LA + H + +RVLDWRQL+KLK+TYTDALQ  I  
Sbjct: 617 DEMKLGTGKKGKTGAYSTDSSVLEELAEQGHVIAQRVLDWRQLAKLKNTYTDALQAQIVE 676

Query: 654 ETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIE 713
            + RVHT++++A  NTGRL+STDPNLQNIPVR+EEGR+IR AFVA PGH L+S+DYSQIE
Sbjct: 677 GSERVHTAFAMAATNTGRLSSTDPNLQNIPVRTEEGRKIRRAFVAAPGHKLISIDYSQIE 736

Query: 714 LRILAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISG 773
           LR++A +A I ALK AF+DG+DIHA TAS++F VPLD+MT E+RR+AKAINFG+IYGISG
Sbjct: 737 LRLVAEMADIAALKQAFQDGIDIHAATASQVFGVPLDQMTSEIRRKAKAINFGIIYGISG 796

Query: 774 FGLARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHTPEIGA 833
           FGL R L I   EA AFI  YFERF  ++ +M+ T AFA+++ +V TLFGR+ + P I  
Sbjct: 797 FGLGRQLGIAPGEANAFIKAYFERFHELKLWMEATKAFARQNGHVVTLFGRRCYIPGIHD 856

Query: 834 K-GPQAGFAKRAAINAPIQGTAADIIRRAMVRMPAAIADL---PARMLLQVHDELIFEVE 889
           K   +  FA+R AINAPIQGTAADI++RAM R+P A+ +      RMLLQVHDEL+FE  
Sbjct: 857 KNAARRAFAERQAINAPIQGTAADIMKRAMARVPGALKEAGFDEVRMLLQVHDELLFEAP 916

Query: 890 EDAVDRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
           ED  +R    VRQVMEGAA     L VPL  +AG G +W EAH
Sbjct: 917 EDQAERAAALVRQVMEGAAT----LGVPLVAEAGIGGNWDEAH 955