Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 921 a.a., DNA polymerase I from Pseudomonas syringae pv. syringae B728a

 Score =  687 bits (1774), Expect = 0.0
 Identities = 407/948 (42%), Positives = 568/948 (59%), Gaps = 56/948 (5%)

Query: 9   LHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDK 68
           L L+DGS++++RA+HALPPL   S GLP GAV G  NML+          +   AV+FD 
Sbjct: 6   LVLVDGSSYLYRAFHALPPLAT-SKGLPTGAVKGVLNMLKSLRRQYPDSPL---AVVFDA 61

Query: 69  GSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIATLACQ 128
              TFR+ LY+ YKANR +MP+DLR Q+ L     +        +EG EADD+I TLA  
Sbjct: 62  KGGTFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLARS 121

Query: 129 AREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDVQALAG 188
           +  A     I + DKD+ QLV G + +++ M    +DV GV EKFGVGP+ ++D  AL G
Sbjct: 122 SAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSVLDVAGVKEKFGVGPEHIIDYLALMG 181

Query: 189 DSVDNVPGAPGIGIKTAA-LLINEYGSLEELLDRAGEIKQPKRRQT------LIEHRAQI 241
           D VDN+PG PG+G KTA  LL+   G ++EL +   ++     R        L EHR   
Sbjct: 182 DKVDNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHREMA 241

Query: 242 ELSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTK---RISGALGVEAP 298
            LS  L  +  D+ LD  ++ L   +P+ +TL+   AE+EF++  +   R +   G E  
Sbjct: 242 FLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQEL- 300

Query: 299 AVPEPAATTASPEAEEHPPLSASEHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEMR 358
            + EP A     EA E      + +  I +     +W+  + A  + A  T++ G +  R
Sbjct: 301 TIEEPTA-----EARE------AAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQR 349

Query: 359 ADLVGVSLCVDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQLDFETALGMLKPVLEDPA 418
           A LVG+S  +    AAY+PL H   G               QLD +T L  LKP+LEDP 
Sbjct: 350 AQLVGLSFAIQTHEAAYIPLTHSYMG------------VPQQLDRDTVLKALKPLLEDPD 397

Query: 419 VLKIGQNMKYDAKILAR---NGITVAPID------DTMLLSYALHAGLHGHGMDALSERY 469
            +K+GQ+ K+   +LA    +G     ID      DT+L SY L +    H  D+L  +Y
Sbjct: 398 KIKVGQHAKFAINLLANCAIDGDQAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKY 457

Query: 470 LDHTPIPIKTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLH-LAQVTRV 528
           L HTPI  + + G G   ++FD + +E+A  YAAE+A++TLRL +    RL  +  +  V
Sbjct: 458 LTHTPINFQEIAGKGAKQLSFDQIALEQAGNYAAEEADLTLRLHEVFDARLAAIPTLQPV 517

Query: 529 YEWMERPMVPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQ 588
              +E P+VPVLA +E +G  VD + L   S     KM  LE E   +AGE FN+GSP Q
Sbjct: 518 LNDIEMPLVPVLARIERQGALVDANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQ 577

Query: 589 LGEILFEKMGFEGGKTGKSGKYSTPADVLEDLATEH-DLPRRVLDWRQLSKLKSTYTDAL 647
           LG IL+EK+G        +G+ ST   VL +LA +   LP+ ++ +R +SKLKSTYTD L
Sbjct: 578 LGVILYEKLGMPILSKTATGQASTAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRL 637

Query: 648 QDHINPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSL 707
            + INP TGR+HTSY  A A TGRL+S+DPNLQNIP+R+ EGRRIR+AFVA  G+ L++ 
Sbjct: 638 PEQINPRTGRIHTSYHQAVAVTGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAA 697

Query: 708 DYSQIELRILAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGV 767
           DYSQIELRI+AH+A  + L  AFR+ LD+H  TA+E+F V L+ +T ++RR AKAINFG+
Sbjct: 698 DYSQIELRIMAHLAQDEGLLHAFRNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGL 757

Query: 768 IYGISGFGLARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIH 827
           IYG+S FGLA+ + + R ++QA++D YF R+PG+  YM+ T A A E  +V+T+FGR+++
Sbjct: 758 IYGMSAFGLAKQIGVDRKQSQAYVDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLY 817

Query: 828 TPEIGAKGPQ-AGFAKRAAINAPIQGTAADIIRRAMVRMPAAI--ADLPARMLLQVHDEL 884
            P+I AK       A+R AINAP+QGTAADII++AMV +   +  + L AR++LQVHDEL
Sbjct: 818 LPDINAKNQSLRKGAERMAINAPMQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDEL 877

Query: 885 IFEVEEDAVDRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
           + EV ED VD++   +R  M GAA     L VPL V+ G G +W EAH
Sbjct: 878 VLEVREDLVDQISEQIRPHMSGAA----ELAVPLLVEVGVGNNWDEAH 921