Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 953 a.a., DNA polymerase I from Synechococcus elongatus PCC 7942

 Score =  514 bits (1324), Expect = e-149
 Identities = 355/975 (36%), Positives = 508/975 (52%), Gaps = 82/975 (8%)

Query: 9   LHLIDGSAFIFRAYHALPPLT----RKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAV 64
           L L+DG +  FR+Y+A         R   G+P     GF   L   +E         +A+
Sbjct: 8   LLLVDGHSLAFRSYYAFAKGRDGGLRTRTGIPTSVCFGFLKALLEVMEQQ---QPKALAI 64

Query: 65  IFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIAT 124
            FD G  TFR++  + YKANR+  PED +          +  N+      G+EADD++ T
Sbjct: 65  AFDLGGPTFRHEADENYKANRDEAPEDFKIDTDNLVALLQTLNLPILVEPGYEADDLLGT 124

Query: 125 LACQAREAGGRCTIISSDKDLMQLVG--GGVEML----------DAMKNKTIDVDGVFEK 172
           +A +  EAG R  I+S D+DL QLV   G + +L          +    + ID   V +K
Sbjct: 125 VAQRGAEAGYRVRILSGDRDLFQLVDPEGAIRVLYLGNTFGRSANREAAREIDPAAVIDK 184

Query: 173 FGVGPDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQ 232
            GV P++V+D +AL GDS DN+PG  GIG KTA  L+  +G L+ + D    IK P  R+
Sbjct: 185 LGVPPEQVIDFKALCGDSSDNIPGVKGIGPKTAVDLLQAWGDLDRIYDNLEAIK-PAVRK 243

Query: 233 TLIEHRAQIELSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEME---FRTLTKRI 289
            L   R     S++L Q+  D+ L    +   +   + + +L +L ++E   FR    R+
Sbjct: 244 KLESDREAAYHSRKLAQIVTDIPLAIDWDHYALTGFDEQEVLPWLEKLELQAFRRQVDRL 303

Query: 290 SGALGVEAPAVPEPAAT-----TASPEAEEHPPLSASEHVTIRDAETLQSWIDAIHAR-- 342
               G + P V   +       TA   A + P     +   I  A  L   +  +  R  
Sbjct: 304 QQLFGGQPPTVEALSDESLDFWTAEETAAQQPRWPQLQPQIITTAAALTDLVTLLEQRDS 363

Query: 343 --GVVAVDTETTGLNEMRADLVGVSLC--VDPGRAAYLPLAHKDGGGADDLFGGEAKLAE 398
              +VA DTETT L+   A LVG+      +P + AY+PL H++G               
Sbjct: 364 PEAIVAWDTETTDLDPRLAQLVGIGCAWGEEPDQLAYIPLGHEEGE-------------- 409

Query: 399 GQLDFETALGMLKPVLEDPAVLKIGQNMKYDAKILARNGITVAPID-DTMLLSYALHAGL 457
            QL  +T L  L+P+LE     K  QN K+D  IL   GI +A +  DTML SY L+  L
Sbjct: 410 -QLPLQTVLTALRPILESDRHPKALQNAKFDRLILRHQGIELAGVVFDTMLASYLLNPSL 468

Query: 458 HGHGMDALSERYLDHTPIPIKTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLK 517
            GH +DAL++R+L         L+  GK   T   V I    +Y   D  +  RL   LK
Sbjct: 469 -GHSLDALADRWLKLQTRSYSDLVPKGK---TIAQVAIAAVAQYCGSDVHVVQRLIPLLK 524

Query: 518 PRLHLAQVTR-VYEWMERPMVPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHEL 576
             +  +   + + E +E P+  VLAEME RGI++D   L+ +S     ++  LE   H L
Sbjct: 525 AGIAESPALQFLLETVELPLEAVLAEMEDRGIRIDEGYLAELSEHLKGELDRLEGAAHTL 584

Query: 577 AGESFNVGSPAQLGEILFEKMGFEGGKTGKSGK-YSTPADVLEDLATEHDLPRRVLDWRQ 635
           AG+ FN+GSP QL E+LFEK+G    K+ K+   YST A VLE L  +H +   +L+ R 
Sbjct: 585 AGDRFNLGSPKQLSELLFEKLGLNVKKSRKTKTGYSTDAAVLEKLQGDHPIIDLILEHRT 644

Query: 636 LSKLKSTYTDALQDHINPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREA 695
           L+KLKSTY DAL   +  + GR+HT ++ A   TGRL+S++PNLQNIP+R+E  R+IR+A
Sbjct: 645 LAKLKSTYVDALPSLVAAD-GRIHTDFNQAVTATGRLSSSNPNLQNIPIRTEFSRQIRKA 703

Query: 696 FVAEPGHVLVSLDYSQIELRILAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPE 755
           F+   G +L + DYSQIELRILAH++    L  A+R G D+H +TAS +FD   +E+T E
Sbjct: 704 FLPREGWLLAAADYSQIELRILAHLSQEPVLLEAYRQGDDVHRLTASLLFD--REEITSE 761

Query: 756 VRRQAKAINFGVIYGISGFGLARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEH 815
            RR  K INFGVIYG+     AR       EAQ FID +++R+P +  Y+      A   
Sbjct: 762 ERRIGKIINFGVIYGMGAQRFARETGSSTKEAQGFIDRFYDRYPRVFTYLQSLERQAIAR 821

Query: 816 KYVQTLFGRKIH-------TPEIGAKGPQA------------GFAKRAAINAPIQGTAAD 856
            YV+T+ GR+ +         ++    P++                RAA NAPIQG++AD
Sbjct: 822 GYVETVLGRRRYFDFEDTGLQKLRGSDPESIDLDKIRPSRFEAQLLRAAANAPIQGSSAD 881

Query: 857 IIRRAMVRMPAAIADLPARMLLQVHDELIFEVEEDAVDRVIPAVRQVMEGAAAPVVHLDV 916
           II+ AMV++ A +    ARMLLQVHDEL+ E+  +  D + P ++Q ME A    V L V
Sbjct: 882 IIKVAMVQLQALLQSYQARMLLQVHDELVLELPPEEWDSLAPQIQQTMEQA----VQLTV 937

Query: 917 PLTVDAGQGRSWAEA 931
           PL V+   G +W EA
Sbjct: 938 PLAVELHAGHNWMEA 952