Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 937 a.a., DNA polymerase I from Phaeobacter inhibens DSM 17395

 Score = 1460 bits (3779), Expect = 0.0
 Identities = 744/934 (79%), Positives = 818/934 (87%), Gaps = 6/934 (0%)

Query: 3   FGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDV-TH 61
           FG G HLHLIDGSAFIFRAYHALPPLTRKSDGLP+GAV+GFCNML RYVEGN G D  TH
Sbjct: 6   FGTGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGPDAPTH 65

Query: 62  VAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDI 121
           VAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKE EGFEADDI
Sbjct: 66  VAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGFEADDI 125

Query: 122 IATLACQAREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVV 181
           IATLACQAR+AGGR TIISSDKDLMQLVGGGVEMLDAMKNK ID DGVFEKFGVGPDRVV
Sbjct: 126 IATLACQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDTDGVFEKFGVGPDRVV 185

Query: 182 DVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQTLIEHRAQI 241
           DVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLE+LL+RA EIKQPKRRQTLIE+RAQI
Sbjct: 186 DVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEDLLNRAEEIKQPKRRQTLIENRAQI 245

Query: 242 ELSKRLVQLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEAPAVP 301
           ELSK+LVQLD +MELDFT++DL VRDP+ + LL FLAEMEFRTL+KR++  LG EAPA+ 
Sbjct: 246 ELSKQLVQLDNNMELDFTLDDLGVRDPDADHLLSFLAEMEFRTLSKRVADQLGKEAPAIV 305

Query: 302 E-PAATTASPEAEE--HPPLSASEHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEMR 358
           + PA +T + EA      P  +S +  +RDA  L+ W+  I  RG VAVDTETTG +EM 
Sbjct: 306 DAPAQSTDTAEAATVADMPFDSSSYECVRDAGALKKWVIQIRERGWVAVDTETTGFDEMV 365

Query: 359 ADLVGVSLCVDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQLDFETALGMLKPVLEDPA 418
            DLVG+SLCV+PGRA Y+PL HK G  +DDLFG +  LA+GQ+  + AL +LKPVLED +
Sbjct: 366 VDLVGISLCVEPGRACYIPLTHKSGS-SDDLFGSD-DLADGQMPLQDALDLLKPVLEDNS 423

Query: 419 VLKIGQNMKYDAKILARNGITVAPIDDTMLLSYALHAGLHGHGMDALSERYLDHTPIPIK 478
           +LKIGQNMKYDAKI AR GI VAPIDDTML+SYA+HAG HGHGMD LSERYL+HTPIPIK
Sbjct: 424 ILKIGQNMKYDAKIFARRGIDVAPIDDTMLMSYAMHAGQHGHGMDTLSERYLNHTPIPIK 483

Query: 479 TLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLHLAQVTRVYEWMERPMVP 538
            LLGTGKSAITFD VPI++A  YAAEDA+ITLRLWQ  KP+LH + VT VYE +ERP+VP
Sbjct: 484 PLLGTGKSAITFDRVPIDDAVAYAAEDADITLRLWQLFKPQLHQSGVTTVYETLERPLVP 543

Query: 539 VLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFEKMG 598
           VLA ME  GIKVDRDTLSRMSNAFAQKMAGLEAEIHELAG++FNVGSP QLGEILF+K+G
Sbjct: 544 VLARMEREGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGQNFNVGSPKQLGEILFDKLG 603

Query: 599 FEGGKTGKSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLKSTYTDALQDHINPETGRV 658
            EGGK GK+G Y+T AD+LEDLATEH LP  VLDWRQLSKLKSTYTDALQDHIN ETGRV
Sbjct: 604 MEGGKKGKTGAYATGADILEDLATEHALPGLVLDWRQLSKLKSTYTDALQDHINAETGRV 663

Query: 659 HTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIELRILA 718
           HTSY   GANTGRLASTDPNLQNIP+RSEEGRRIREAFV E G+VL++LDYSQIELRILA
Sbjct: 664 HTSYVQTGANTGRLASTDPNLQNIPIRSEEGRRIREAFVPEEGNVLLALDYSQIELRILA 723

Query: 719 HIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISGFGLAR 778
           H+AGID LK AF +G DIHA+TASEMF+VPL+EMT ++RRQAKAINFGVIYGISGFGLAR
Sbjct: 724 HVAGIDTLKQAFAEGQDIHALTASEMFNVPLEEMTSDIRRQAKAINFGVIYGISGFGLAR 783

Query: 779 NLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHTPEIGAKGPQA 838
           NLRIPRAEAQ FID YFERFPGIR YMD+TVAFAKEH +VQTLFGRKIHTPEI AKGP+A
Sbjct: 784 NLRIPRAEAQGFIDRYFERFPGIRRYMDETVAFAKEHGHVQTLFGRKIHTPEISAKGPRA 843

Query: 839 GFAKRAAINAPIQGTAADIIRRAMVRMPAAIADLPARMLLQVHDELIFEVEEDAVDRVIP 898
           GFAKRAAINAPIQGTAAD+IRRAM+RMPAAIA LPARMLLQVHDEL+FEV E AV+  I 
Sbjct: 844 GFAKRAAINAPIQGTAADVIRRAMIRMPAAIAHLPARMLLQVHDELLFEVPEAAVEDTIE 903

Query: 899 AVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
              QVME AA P VHLDV L VDAG+G++WAEAH
Sbjct: 904 TASQVMETAADPAVHLDVKLVVDAGRGQNWAEAH 937