Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 908 a.a., DNA polymerase I from Dyella japonica UNC79MFTsu3.2

 Score =  715 bits (1846), Expect = 0.0
 Identities = 410/930 (44%), Positives = 576/930 (61%), Gaps = 31/930 (3%)

Query: 9   LHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVTHVAVIFDK 68
           L LIDGS++++RA+HALPPLT  + G P GA+ G  NML+  ++        +VA + D 
Sbjct: 4   LILIDGSSYLYRAFHALPPLTN-AQGEPTGALFGVVNMLRSTLKARP----EYVAFVSDA 58

Query: 69  GSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDIIATLACQ 128
              TFR+ +YDQYKANR  MP+DL  Q+        A       + G EADD+I TLA Q
Sbjct: 59  PGPTFRDAMYDQYKANRPPMPQDLGAQVEPMLAIVSALGFPILRVTGVEADDVIGTLAVQ 118

Query: 129 AREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVDVQALAG 188
           A   G    I + DKDL QLV  GV +++ M N T+D  GV EKFGV P++++D   L G
Sbjct: 119 AHARGIEVEISTGDKDLAQLVRPGVTLVNTMTNTTMDDAGVMEKFGVRPEQIIDYLTLVG 178

Query: 189 DSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQTLIEHRAQIELSKRLV 248
           DSVDNVPG P  G KTAA  + EYGSL+ ++  A ++   K  ++L     Q+ LS+ LV
Sbjct: 179 DSVDNVPGVPKCGPKTAAKWLAEYGSLDGVIANADKVGG-KIGESLRAALPQLPLSRELV 237

Query: 249 QLDCDMELDFTIEDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEAPAVPEPAATTA 308
            +  D+ L+  +E L++R+ + + L       EF+   K + G  G  A A P P A  A
Sbjct: 238 TVRLDVPLEQGVEALKLRERDADKLRELYTRYEFKAALKELEG--GESAAAAPVPTAAPA 295

Query: 309 SPEAEEHPPLSASEHVTIRDAET-LQSWIDAIHARGVVAVDTETTGLNEMRADLVGVSLC 367
              A+    LS      +   E  L +W+D + +  ++A DTETT ++ MRAD+VG+SL 
Sbjct: 296 VAPAQPADDLSGPGRYELVATEAQLDAWVDKLRSAELIAFDTETTSIDAMRADIVGLSLA 355

Query: 368 VDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQLDFETALGMLKPVLEDPAVLKIGQNMK 427
           V+ G A Y+P+AH   G            A  QL  E  L  LKP+ EDPA  K+GQ+ K
Sbjct: 356 VETGEACYIPVAHDFPG------------APAQLPRELVLAKLKPIFEDPARPKLGQHAK 403

Query: 428 YDAKILARNGITVAPID-DTMLLSYALHAGLHGHGMDALSERYLDHTPIPIKTLLGTGKS 486
           YD  +L+  GI +  +  D+ML SY  +A    H MD+L+ +YL +  +  + + G G  
Sbjct: 404 YDINMLSHYGIVLQGLKHDSMLESYVWNATATRHDMDSLARKYLGYETVKYEEVAGKGAK 463

Query: 487 AITFDFVPIEEATKYAAEDAEITLRLWQRLKPRL-HLAQVTRVYEWMERPMVPVLAEMEM 545
            I+F  V ++ A +YAAEDA+ITLRL + L P L H+ ++  VYE +E P+VPVLA ME 
Sbjct: 464 QISFSQVDLDTACRYAAEDADITLRLHRALWPLLEHVPRLRSVYEDIEIPLVPVLAGMEQ 523

Query: 546 RGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFEKMGFEGGKTG 605
           RG+ +D  +L   S    ++M  L+ +  + AG  F++ SP QL  +LF+++G       
Sbjct: 524 RGVLIDVASLRLQSQQLGKRMLELQQQAWKTAGHDFSLDSPKQLQSVLFDELGLPAKLRT 583

Query: 606 KSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLKSTYTDALQDHINPETGRVHTSYSIA 665
            +G+ ST  + LE +A EH LPR +LD+R L+KL+STYT+ L + +NP TGRVHTSY   
Sbjct: 584 PTGQPSTNEEALEAIADEHPLPRLILDYRGLAKLRSTYTEKLAEIVNPRTGRVHTSYHQG 643

Query: 666 GANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIELRILAHIAGIDA 725
              TGR++S+DPNLQNIPVR+EEGRRIR+AF+A PG  +++ DYSQIELRI+AH++G + 
Sbjct: 644 AVATGRVSSSDPNLQNIPVRTEEGRRIRQAFIAPPGWKVMAADYSQIELRIMAHLSGDEG 703

Query: 726 LKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISGFGLARNLRIPRA 785
           L  AF++G D+H  TA+E+F +  +E++   RR AKAINFG++YG+S FGLAR L + R 
Sbjct: 704 LMRAFQEGGDVHRATAAEVFGLAPEEVSANQRRAAKAINFGLMYGMSAFGLARQLGVDRG 763

Query: 786 EAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHTPEIGAKGP--QAGFAKR 843
           EA  ++  YF R+PG+ A+MD T   A    YV+T+FGR+++   +  +    +AG A+R
Sbjct: 764 EASDYMARYFARYPGVHAFMDATREQAHRDGYVETIFGRRLYLENLTNRNQALRAG-AER 822

Query: 844 AAINAPIQGTAADIIRRAMVRMPAAIADL-PARMLLQVHDELIFEVEEDAVDRVIPAVRQ 902
           AA+NAP+QG+AADII+RAM+ + A +     A ML+QVHDEL+FEV EDAVD V  AV  
Sbjct: 823 AAVNAPMQGSAADIIKRAMISVAAWLKGRDDAHMLMQVHDELVFEVHEDAVDEVRAAVVA 882

Query: 903 VMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
            M GAA     L VPL V+AG G +W EAH
Sbjct: 883 RMSGAA----ELRVPLLVEAGVGANWDEAH 908