Pairwise Alignments

Query, 932 a.a., DNA polymerase I (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 913 a.a., DNA polymerase I from Paraburkholderia bryophila 376MFSha3.1

 Score =  677 bits (1748), Expect = 0.0
 Identities = 412/939 (43%), Positives = 570/939 (60%), Gaps = 44/939 (4%)

Query: 5   KGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLQRYVEGNAGGDVT--HV 62
           +G  L L+DGS++++RAYHA+P L R  DG P GA+ G  NML+R  +     +VT  + 
Sbjct: 8   EGKTLLLVDGSSYLYRAYHAMPDL-RGPDGGPTGALYGMINMLRRMRK-----EVTAEYS 61

Query: 63  AVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEMEGFEADDII 122
           A +FD    TFR+D Y  YKANR +MP+DL  QI     A  A       ++G EADD+I
Sbjct: 62  ACVFDAKGKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDVI 121

Query: 123 ATLACQAREAGGRCTIISSDKDLMQLVGGGVEMLDAMKNKTIDVDGVFEKFGVGPDRVVD 182
            TL+ +A + G    + + DKDL QLV   V +++ M N+ +D  GV  KFGV P+R+VD
Sbjct: 122 GTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERIVD 181

Query: 183 VQALAGDSVDNVPGAPGIGIKTAALLINEYGSLEELLDRAGEIKQPKRRQTLIEHRAQIE 242
             +L GD+VDNVPG    G KTA   ++++ SL+ ++  A EIK       L      + 
Sbjct: 182 YLSLIGDTVDNVPGVEKCGPKTALKWLSQFESLDGIVAHADEIKGAVG-DNLRRALDFLP 240

Query: 243 LSKRLVQLD--CDMELDFTI--EDLEVRDPEPETLLGFLAEMEFRTLTKRISGALGVEAP 298
           ++++LV ++  CD+    T   E+L+ R    E L        F+T  + +  A  VE P
Sbjct: 241 MARKLVTVERHCDLTGHLTSIEENLQSRPESREELRDVFTRHGFKTWLREVEIADAVEGP 300

Query: 299 AVPEPAATTASPEAEEHPPLSASEHVTIRDAETLQSWIDAIHARGVVAVDTETTGLNEMR 358
               P A   S + E H       + T++  E   +W+  I+A G+ + DTETT L+ M 
Sbjct: 301 ETDVPPAL--SVDHERH-------YETVQTWEQFDAWLQKINAAGLTSFDTETTSLDPMT 351

Query: 359 ADLVGVSLCVDPGRAAYLPLAHKDGGGADDLFGGEAKLAEGQLDFETALGMLKPVLEDPA 418
           A +VG+SL V+ G AAY+PLAH+   G D         A  QL  +  L  LKP LE   
Sbjct: 352 AQIVGLSLSVEAGHAAYVPLAHR---GPD---------APVQLPRDEVLARLKPWLESAE 399

Query: 419 VLKIGQNMKYDAKILARNGITVAPID-DTMLLSYALHAGLHGHGMDALSERYLDHTPIPI 477
             K+GQ++KYD ++LA  GI +  ++ DT+L SY L +    H MD L+ R+L    I  
Sbjct: 400 YKKVGQHLKYDEQVLANYGIEMRGVEHDTLLQSYVLESH-RPHDMDNLALRHLGIKTIKY 458

Query: 478 KTLLGTGKSAITFDFVPIEEATKYAAEDAEITLRLWQRLKPRLHLAQ-VTRVYEWMERPM 536
           + + G G   I FD V +++A +YAAEDA++TLRL Q L P+L   + +  VY  +E P 
Sbjct: 459 EDVAGKGAQQIGFDEVALDKAAEYAAEDADVTLRLHQALYPQLAAEEALEHVYRDIEVPT 518

Query: 537 VPVLAEMEMRGIKVDRDTLSRMSNAFAQKMAGLEAEIHELAGESFNVGSPAQLGEILFEK 596
             VL +ME  G+ +D + L + S+  A ++  LE+E + LAG  FN+GSP Q+G+I FE+
Sbjct: 519 SRVLRKMERTGVLIDAEKLRQQSSEIAARLIQLESEAYVLAGGEFNLGSPKQIGQIFFER 578

Query: 597 MGFEGGKTGKSGKYSTPADVLEDLATEHDLPRRVLDWRQLSKLKSTYTDALQDHINPETG 656
           +     K   SG  ST  +VL+ LA ++ LP+ +L+ R LSKLKSTYTD L   +N  TG
Sbjct: 579 LELPVVKKTPSGAPSTDEEVLQKLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVNATTG 638

Query: 657 RVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEPGHVLVSLDYSQIELRI 716
           RVHT+Y+ A A TGRLAS DPNLQNIPVR+ EGRRIREAF+A PGH LVS DYSQIELRI
Sbjct: 639 RVHTNYAQAVAVTGRLASNDPNLQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRI 698

Query: 717 LAHIAGIDALKTAFRDGLDIHAMTASEMFDVPLDEMTPEVRRQAKAINFGVIYGISGFGL 776
           +AHI+G ++L  AF  G DIH  TA+E+F V   E++ + RR AK INFG+IYG+S FGL
Sbjct: 699 MAHISGDESLLRAFSQGEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGL 758

Query: 777 ARNLRIPRAEAQAFIDTYFERFPGIRAYMDDTVAFAKEHKYVQTLFGRKIHTPEI-GAKG 835
           A NL I R  A+ +ID YF R+PG+  YMD+T   AK   YV+T+FGR++  PEI G  G
Sbjct: 759 ASNLGITRDAAKLYIDRYFARYPGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNG 818

Query: 836 PQAGFAKRAAINAPIQGTAADIIRRAMVRMPAAI--ADLPARMLLQVHDELIFEVEEDAV 893
           P+   A+RAAINAP+QGTAAD+I+ +M+ +   I  A +  RM++QVHDELI EV +  +
Sbjct: 819 PRRQAAERAAINAPMQGTAADLIKLSMIAVQKWIEQARIGTRMIMQVHDELILEVPDAEL 878

Query: 894 DRVIPAVRQVMEGAAAPVVHLDVPLTVDAGQGRSWAEAH 932
             V   + ++M G AA    L VPL  + G G +W EAH
Sbjct: 879 SEVHQRLPELMCGVAA----LKVPLVAEVGAGLNWEEAH 913