Pairwise Alignments

Query, 600 a.a., succinate dehydrogenase, flavoprotein subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 594 a.a., Succinate dehydrogenase flavoprotein subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  858 bits (2216), Expect = 0.0
 Identities = 425/602 (70%), Positives = 490/602 (81%), Gaps = 10/602 (1%)

Query: 1   MSAYEYETHNYDVVVVGAGGAGLRATLGMAEQGLRTACISKVFPTRSHTVAAQGGIAASL 60
           M++YE   H YD +VVGAGGAGLRAT G+ EQGL+TACI+KVFPTRSHTVAAQGGI A+L
Sbjct: 1   MASYEIVDHEYDALVVGAGGAGLRATFGLVEQGLKTACITKVFPTRSHTVAAQGGIGAAL 60

Query: 61  SNMGPDHWQWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEGKIYQR 120
            NM  D+W+WHMYDTVKG+DWLGD DA+EY+ REA  AVYELEHYGVPFSRTE+G+IYQR
Sbjct: 61  GNMAEDNWKWHMYDTVKGADWLGDQDAIEYMCREAIPAVYELEHYGVPFSRTEDGRIYQR 120

Query: 121 PFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNNAEFFIEYFAIDLIMSEDGQ 180
           PFGGH   FGE P VQR CAAADRTGHAIL TLY QSL+ NAEFF+EYFA+DLI+ EDG 
Sbjct: 121 PFGGHMRNFGEAP-VQRACAAADRTGHAILQTLYQQSLRFNAEFFVEYFALDLII-EDGV 178

Query: 181 CQGVVCWKLDDGTIHVFNAKMTVLATGGYGRAYFSATSAHTCTGDGGGMVARQGLPLQDM 240
           C+GV+ W ++DGTIH F +  TVLATGGYGRAYFS TSAHTCTGDG GMVAR GLPLQDM
Sbjct: 179 CRGVIAWCMEDGTIHRFKSHTTVLATGGYGRAYFSCTSAHTCTGDGNGMVARAGLPLQDM 238

Query: 241 EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSRCMTME 300
           EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPT KDLASRDVVSR MT+E
Sbjct: 239 EFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTAKDLASRDVVSRAMTVE 298

Query: 301 IREGRGVGPDGDHIHLHLNHLPPETLALRLPGISESARIFAGVDVNKEPIPVLPTVHYNM 360
           IREGRGVGP  DHI+LHL HL PE L  RLPGI+E+A++F+GVD  ++PIPVLPTVHYNM
Sbjct: 299 IREGRGVGPKKDHINLHLEHLGPEVLHSRLPGITETAKVFSGVDATRDPIPVLPTVHYNM 358

Query: 361 GGIPTNYWGEVLNPTAEDPDRIAPGLMAVGEAGCASVHGANRLGSNSLIDLVVFGRAAAI 420
           GGIPTNY GEVLNPT  DP+ I PGLMAVGE  C SVHGANRLG+NSL+D+VVFGRAAA+
Sbjct: 359 GGIPTNYHGEVLNPTKADPEAIFPGLMAVGECACVSVHGANRLGTNSLLDIVVFGRAAAL 418

Query: 421 KAGQVVDPTVSNPTLNQASIDAALARFDGLRHAKGNVSTAELRLEMQKTMQADAAVFRTD 480
           +A +VV P +++  L   + D AL+R D LR AKG   TAE+R ++Q+ MQ DAAVFRT 
Sbjct: 419 RAAEVVKPGIAHKPLKADAADLALSRLDRLRSAKGAKLTAEIRDDLQQAMQRDAAVFRTT 478

Query: 481 KTLAEGVQKMYGVAGKVDDIKVTDRSLVWNSDLMETLELTNLMPNALATIVSAEARKESR 540
           K+LAEGV ++  VA  + DIK+ D S+++N+DL E LEL NLM  A  TI  A AR+ESR
Sbjct: 479 KSLAEGVARVDQVAASLADIKLVDTSMIFNTDLAEALELENLMACAQTTIHGAAARQESR 538

Query: 541 GAHAHEDYADRDDENWRKHTLAYVN--GKVDLDYRPVHLNPLLGHNEGGIDLKKIAPKAR 598
           GAHAHED+ DRDD+ W KHTLA+++  GKV LDYRPVH   L        ++  I PKAR
Sbjct: 539 GAHAHEDFPDRDDKTWMKHTLAWLDPKGKVTLDYRPVHTFTLTD------EIDYIEPKAR 592

Query: 599 VY 600
           VY
Sbjct: 593 VY 594