Pairwise Alignments

Query, 346 a.a., diguanylate cyclase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 605 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  107 bits (268), Expect = 6e-28
 Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 3/171 (1%)

Query: 157 VARLQEAKTVAESRALTDTLTGLHNRRAMDLTFEQLLANPPRDGFGL--MLIDLDYFKSV 214
           V R +E +     +A  D L+GL NRR +    ++ +A+  +  + L  + IDLD FK V
Sbjct: 154 VTRRKEVEFKLRHQANYDPLSGLPNRRLLGDMLQREVASAKKHAYPLAVVFIDLDRFKDV 213

Query: 215 NDTLGHAAGDMVLLEVARILREETRSEDFSFRVGGDEFVLVLRNCNDLGLMTRVADRIIA 274
           ND+LGH+ GD +L+  A+ +R   R  D   R+ GDEFV VL        +TR+ D I+A
Sbjct: 214 NDSLGHSVGDQLLVVAAQRVRASVREHDLVARLAGDEFVAVLPRLEASAALTRIGDDIVA 273

Query: 275 RLEEPFYYDGKPCRISASIGITISEFYDPVEIDKMLSDADEATYASKNRGR 325
            L EPF       RISAS+GI I   +D   +  ++  AD+A +A+K  GR
Sbjct: 274 ALAEPFQLGEHRVRISASVGIAIYP-HDADTVTTLIGCADQAMFAAKGGGR 323