Pairwise Alignments

Query, 246 a.a., protein of unknown function DUF28 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 248 a.a., conserved hypothetical protein TIGR01033 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  242 bits (617), Expect = 6e-69
 Identities = 130/248 (52%), Positives = 170/248 (68%), Gaps = 3/248 (1%)

Query: 1   MAGHSKWANIQHRKGRQDKLRAKLFSKLSKEITVAAKMGDPDPDKNPRLRLAVKEAKSQS 60
           MAGHSKWANI+HRK  QD  R KLF+K  +E+TV+A+ G  DPD NPRLR+A+ +A   +
Sbjct: 1   MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVSAREGGSDPDSNPRLRIAIDKALGGN 60

Query: 61  VPKDVIERAIKKSLGG-EGENYDEIRYEGYGPGGVAVIVEAMTDNRNRTASTVRSTFSKN 119
           + +D IERAIK+  G  EG+  + I YEGYGPGG AV+VE MTDNRNRT S VR+ FSK+
Sbjct: 61  MTRDTIERAIKRGAGELEGQQLETIIYEGYGPGGTAVMVETMTDNRNRTVSGVRNAFSKS 120

Query: 120 GGNLGETGSVSFMFERKGQVSYPAEAGDADTVMMAAIEAGAEDVESDESGHI-IWCADTD 178
           GGNLG  GSV+++F ++G +SY A   D D +M AA+EAGAEDV S + G I ++   T 
Sbjct: 121 GGNLGTDGSVAYLFTKRGVLSY-APGTDEDALMDAALEAGAEDVVSYDDGAIDVFTEPTA 179

Query: 179 LNEVSTALEAELGESESTKLVWRPTTTTELDLEGMQKLMKLLDALEDDDDVQNVTANFEA 238
             EV  AL+A    S++ ++    +T  ELD E  +K M+L+D LE+ DDVQ V  N E 
Sbjct: 180 FYEVKDALDAAGFVSDNAEIAMIASTKAELDAETAEKFMRLIDTLEEHDDVQEVYHNAEI 239

Query: 239 SDEVMAQL 246
           SDE+M  L
Sbjct: 240 SDEIMESL 247