Pairwise Alignments

Query, 530 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1364 a.a., Two-component system sensor protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  234 bits (597), Expect = 2e-65
 Identities = 163/508 (32%), Positives = 255/508 (50%), Gaps = 22/508 (4%)

Query: 30   SVDRDGVIVAISAYWAARLGYSPDDMIGR-SIMEFMVPES--------ANRARTEVMPTL 80
            + D  G +   +      LGYS DD+IGR    +F+  +         A +  T V  TL
Sbjct: 508  ATDSSGFVTMFNPAAEKLLGYSADDVIGRRKASQFIEADELQERALRLAEQTGTPVAGTL 567

Query: 81   LRTSSV------DKIRHTFLRQDGTPFHALVSAVVLRDADGAFLRTLSIVSADDGTDGLQ 134
               +++      D    T++ QDG     L++   LRD +   +  L +          +
Sbjct: 568  EAVAALTSLGRSDTSEWTYVSQDGRRLPVLLTLSTLRDDNDQVIGYLGVAVDLTEQKLHE 627

Query: 135  QDLQAALIRAEDASRAKSRFLAAMSHEIRTPMNAILGFAQLLRLSDLDEKRRGHVDAIIA 194
            + L+ A+  A  A+++KS FLA MSHEIRTPMNAILG   LL+ S+L    +  V  I  
Sbjct: 628  KQLRLAMDAARSANQSKSDFLANMSHEIRTPMNAILGMLYLLQRSELPGAAQDMVTKIDR 687

Query: 195  AGGQLMNLLTDLLDLSHMETGRMRIESRATDLMPLLDQVADWWYSSVSEKGLTLQVEIDD 254
            +   L+ ++ D+LD S +E GR+ +E    DL  L D +AD   SS+S K + + VE   
Sbjct: 688  SARSLLEIINDILDFSKIEAGRIDLERAPFDLNQLFDNIADLMRSSLSAKPVEMIVEPLP 747

Query: 255  RMPARVLTDPVRLQQVLNNFMANALRYTDRGTITLRVREISRSD-SFSRLRLEVEDTGIG 313
            R    +L D +R+ QVL N + NA+++T++G + L VR     D +  +L   V DTGIG
Sbjct: 748  RECRWLLGDALRINQVLVNLVGNAIKFTEQGEVVLSVRRFPSGDPNKIKLLFSVRDTGIG 807

Query: 314  ISEEQQALLFRPFVQIESDFGKDRGGWGLGLSICHNIAAAMSADIGVTSQPGAGATFHFE 373
            IS+E+Q+L+F PF+Q ++   +  GG GLGL+I   +   M   + V S PG G+ F+F 
Sbjct: 808  ISKEKQSLIFSPFLQADTSTSRRYGGSGLGLTISRRLIELMGGALEVESVPGRGSEFYFV 867

Query: 374  LTLPLEPCPEPRETPQPHPARAPRGPSAKVLVAEDNPLNQNVMEAMLRDLGHEVRVVSNG 433
            +TL     P+     Q   A  P     +VL+A+D+    N +  +  +LG  V  V++G
Sbjct: 868  ITLERTDPPK----AQQEAALLPPESMPRVLIADDHDAALNNLVRIATELGWRVDAVASG 923

Query: 434  FEAVEAI--LSESFDLVLMDITMPGLDGLGATAQIRTSGPEKSKVPIIACTAHVGGDVQA 491
              A++AI   +E +D+ L+D  MP +DG+    Q+R          I+  TA+    ++ 
Sbjct: 924  QAAMQAIEDATEPYDIFLLDWRMPDIDGVAIARQVRARATPGRHPVIVMVTAYERRLLEQ 983

Query: 492  RYRDAGIDGFLPKPVDPRALEAAINSAV 519
                  +D  + KPV   AL   +   V
Sbjct: 984  HPEQQDLDAVMTKPVTSAALHRLVEQLV 1011



 Score = 71.2 bits (173), Expect = 2e-16
 Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 5/166 (3%)

Query: 360  VTSQPGAGATFHFELTLPLEPCPEPRETPQPHPARAPRGPSAKVLVAEDNPLNQNVMEAM 419
            V ++P   A  H  +   ++  P  R       AR   G  A++L+ +D+ +N  V + +
Sbjct: 993  VMTKPVTSAALHRLVEQLVDERPNARPATPTFVARRLEG--AQLLLVDDSEINCEVAQRI 1050

Query: 420  LRDLGHEVRVVSNGFEAVEAI--LSESFDLVLMDITMPGLDGLGATAQIRTSGPEKSKVP 477
            L   G  V V  +G +AV  +    + F LVLMD+ MP +DG  AT ++R   P  + +P
Sbjct: 1051 LEGEGAMVTVAHDGEQAVNTLKRAPDLFHLVLMDVQMPVVDGYEATRRLRQI-PSLASLP 1109

Query: 478  IIACTAHVGGDVQARYRDAGIDGFLPKPVDPRALEAAINSAVSGGA 523
            +IA TA      Q +  +AG++GF+ KP +   L  AI   +  G+
Sbjct: 1110 VIALTAGAFRPQQEKALEAGMNGFIAKPFNVEELVTAIRHFLQPGS 1155