Pairwise Alignments

Query, 530 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 1186 a.a., Histidine kinase/response regulator hybrid protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  246 bits (627), Expect = 5e-69
 Identities = 145/386 (37%), Positives = 213/386 (55%), Gaps = 6/386 (1%)

Query: 144  AEDASRAKSRFLAAMSHEIRTPMNAILGFAQLLRLSDLDEKRRGHVDAIIAAGGQLMNLL 203
            AE AS+AK+RFLA + HE+RTPM  +LG ++LL  + LD +++G+  AI +AG  L+ L+
Sbjct: 801  AEQASQAKTRFLATLGHEVRTPMTGVLGMSELLLQTPLDGRQQGYASAIQSAGKHLLRLV 860

Query: 204  TDLLDLSHMETGRMRIESRATDLMPLLDQVADWWYSSVSEKGLTLQVEIDDRMPARVLTD 263
             D LDL+ +E G++ ++ R  DL  L+ QV D    S  +K L  +  +D+ +P  +  D
Sbjct: 861  NDALDLARIEAGKLALDDRDFDLRQLIRQVVDLVRPSAEQKQLAFECHLDESLPRALHGD 920

Query: 264  PVRLQQVLNNFMANALRYTDRGTITLRVREISRSDSFSRLRLEVEDTGIGISEEQQALLF 323
              R+QQ+L N + NA+++T+RG + LRV  +        +R+EV DTG G+SEEQ+  LF
Sbjct: 921  ANRVQQILLNLLFNAVKFTERGQVRLRVLPLQAGG--GGIRVEVSDTGPGMSEEQRGRLF 978

Query: 324  RPFVQIESDFGKDR-GGWGLGLSICHNIAAAMSADIGVTSQPGAGATFHFELTLPLEPCP 382
            + F Q E      R GG GLGL+IC  +AAAM   +GV+S  G GA F  EL L     P
Sbjct: 979  QRFEQAEGGRTTTRHGGSGLGLAICRELAAAMGGSVGVSSALGQGACFVVELPLRWVSTP 1038

Query: 383  EPRETPQPHPARAPRGPSAKVLVAEDNPLNQNVMEAMLRDLGHEVRVVSNGFEAVEAILS 442
             P  T              ++L+ ED+     V+  +L+  GH V  V +G  A+  + +
Sbjct: 1039 APSTTAVARAVPPVHQAPLQLLLVEDDVTVAQVIVGLLQGRGHHVTHVLHGLAALAEVSA 1098

Query: 443  ESFDLVLMDITMPGLDGLGATAQIRTSGPEKSKVPIIACTAHVGGDVQARYRDAGIDGFL 502
             SFD  L D+ +PGLDG    AQ+R  G      PI+A TA    D + +   AG +GFL
Sbjct: 1099 RSFDAGLCDLDLPGLDGAALVAQLRARG---VCFPIVAVTARADADAEPQALAAGCNGFL 1155

Query: 503  PKPVDPRALEAAINSAVSGGAFSHGP 528
             KP+    L  A+   ++  A    P
Sbjct: 1156 RKPLTGDLLAQALAQVLADDAMDKAP 1181