Pairwise Alignments

Query, 404 a.a., major facilitator superfamily MFS_1 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 435 a.a., Arabinose efflux permease from Pseudomonas stutzeri RCH2

 Score =  223 bits (567), Expect = 1e-62
 Identities = 133/394 (33%), Positives = 212/394 (53%), Gaps = 10/394 (2%)

Query: 3   VLITFAALFASVALLQVSSGAVGPLDALSGAVLGFSNAEIGMLGSAHYIGFFIGCWGAPR 62
           ++   ++L A VALL +  G +  L  L G   G+S   +G+L S ++ GF IG W AP 
Sbjct: 4   LIAPISSLLAGVALLLLGHGLLNTLLTLRGVAEGYSTGMVGLLMSGYFAGFLIGTWLAPS 63

Query: 63  LLGTVGHSRAFAAFTAAGAIGLLAHMMVVHPLAWAGLRVTTGLCVAGCYTIIESWLNARL 122
           L+  +GH R F+ + +  A  +L H+M+V+P  W  LRV  G+ +   Y +IESWLNA++
Sbjct: 64  LIRRIGHIRTFSFYASVAATAVLLHVMIVNPWVWLVLRVIYGVALVTLYMVIESWLNAQV 123

Query: 123 TNETRGRATGLYRVVDLGAALIAQLMIAVLPPAEYVSYNLLAILCCMALLPIALTQASQP 182
           + E RG+   +Y  V+LGA   AQ ++ +  P E+  + L  IL   A++PI LT+  QP
Sbjct: 124 SGEKRGQVFAVYMAVNLGALAAAQQLLGLDSPMEFTLFALATILIGSAMMPITLTRQPQP 183

Query: 183 AVPKAPRLRPALALAK-SPLAAAAVIVAGLTSAAFRMVGPIYGQDVGLRSDQIGLFLAAY 241
           ++P  P     L LA+ +PL   A  ++G     F  + P+Y  ++G  +  +GL ++  
Sbjct: 184 SLPDIPP-TDLLQLARIAPLPLMAAGISGFVLGGFWGLAPVYASEIGFDAAGVGLLMSIT 242

Query: 242 VLGGALAQYPTGWLADRFDRRRVLIALSVAAIASCAITIHTQSAGTLAVFGAALLFGVTT 301
           +LGGA+ Q+P G  +D+ +RR VL+ + VA  A  A+ +    AG+L + G   ++G   
Sbjct: 243 ILGGAVLQWPIGLFSDKHERRTVLLWV-VALAAVLALAVAPLLAGSL-LLGLMFVWGGLA 300

Query: 302 FPIFSVAAAHAHDFASDDERVELSAALMFMFAVGAIASPLVSSLLIEARGPMALFVFLGL 361
           F I+S+A A   D  + DE +  S+ L+     GA   P+ +  L+   GP+AL +F   
Sbjct: 301 FSIYSIAVAQMVDQLNPDEILSGSSGLLLANGFGAALGPVAAGGLMHLFGPIALPLFFAT 360

Query: 362 GHLVLVVFGLARMRVRPAPQERTDYVYTPRTSFT 395
           G  VL  +   R      P++  D V  P   FT
Sbjct: 361 GLGVLAFYAFYR------PRKVFDLVTEPHGHFT 388